Pre_GI: BLASTP Hits

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Query: NC_012583:361241:390235 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 390235, End: 390774, Length: 540

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009456:787322:873168873168873707540Vibrio cholerae O395 chromosome 1, complete sequenceisochorismatase family protein4e-100363
NC_006138:1921424:193475619347561935352597Desulfotalea psychrophila LSv54, complete genomehypothetical protein6e-60229
NC_010424:448865:457006457006457557552Candidatus Desulforudis audaxviator MP104C, complete genomeisochorismatase hydrolase2e-33141
NC_012108:4907430:492829049282904928847558Desulfobacterium autotrophicum HRM2, complete genomeputative amidase6e-26116
NC_005071:913500:936764936764937330567Prochlorococcus marinus str. MIT 9313, complete genomeIsochorismatase hydrolase family6e-24110
NC_013959:2801557:282271328227132823279567Sideroxydans lithotrophicus ES-1 chromosome, complete genomeisochorismatase hydrolase9e-24109
NC_008820:1143500:114898011489801149609630Prochlorococcus marinus str. MIT 9303, complete genomeIsochorismatase hydrolase family protein3e-23108
NC_010551:2007926:202133420213342021864531Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceisochorismatase hydrolase3e-23107
NC_008390:2058500:207223020722302072760531Burkholderia cepacia AMMD chromosome 1, complete sequenceisochorismatase hydrolase6e-23106
NC_011666:1601983:161942716194271619993567Methylocella silvestris BL2, complete genomeisochorismatase hydrolase2e-22105
NC_011901:491783:513527513527514090564Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeisochorismatase hydrolase5e-22103
NC_016584:4601645:460273746027374603285549Desulfosporosinus orientis DSM 765 chromosome, complete genomenicotinamidase-like amidase1e-2099.4
NC_018870:1953748:197394019739401974488549Thermacetogenium phaeum DSM 12270 chromosome, complete genomeisochorismatase-like protein5e-1993.6
NC_012559:2752825:276478727647872765692906Laribacter hongkongensis HLHK9, complete genomeProbable hydrolase, isochorismatase family2e-1789
NC_002516:4285477:430726643072664307808543Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-1788.6
NC_016830:4295831:431766543176654318219555Pseudomonas fluorescens F113 chromosome, complete genomeisochorismatase hydrolase8e-1579.7
NC_014019:3543389:354561135456113546255645Bacillus megaterium QM B1551 chromosome, complete genomeisochorismatase family protein1e-0859.7
NC_017030:2728175:273379827337982734463666Corallococcus coralloides DSM 2259 chromosome, complete genomeisochorismatase hydrolase9e-0959.7
NC_014618:2788533:279281727928172793440624Enterobacter cloacae SCF1 chromosome, complete genomeisochorismatase hydrolase3e-0858.2
NC_007412:110698:126992126992127657666Anabaena variabilis ATCC 29413 plasmid C, complete sequenceIsochorismatase hydrolase6e-0857
NC_007492:2629350:264970926497092650341633Pseudomonas fluorescens PfO-1, complete genomeIsochorismatase hydrolase1e-0756.2
NC_002939:2844240:284601428460142846646633Geobacter sulfurreducens PCA, complete genomeisochorismatase family protein1e-0755.8
NC_014639:2452286:246101824610182461662645Bacillus atrophaeus 1942 chromosome, complete genomeisochorismatase family protein2e-0755.8
UCMB5137:2418403:242717224271722427816645Bacillus atrophaeus UCMB-5137isochorismatase family protein2e-0755.8
CP002207:2452286:246101824610182461662645Bacillus atrophaeus 1942, complete genomeisochorismatase family protein2e-0755.8
NC_014973:3290545:331596733159673316620654Geobacter sp. M18 chromosome, complete genomeisochorismatase hydrolase2e-0755.5
NC_009512:2108686:213000221300022130688687Pseudomonas putida F1, complete genomeisochorismatase hydrolase3e-0754.7
NC_011832:913994:931034931034931708675Candidatus Methanosphaerula palustris E1-9c, complete genomeisochorismatase hydrolase6e-0753.9
UCMB5137:2418403:242639824263982427042645Bacillus atrophaeus UCMB-5137hypothetical protein8e-0753.1
NC_015733:2963548:297205929720592972745687Pseudomonas putida S16 chromosome, complete genomeisochorismatase superfamily hydrolase1e-0652.8
NC_015723:1486000:152861215286121529238627Cupriavidus necator N-1 chromosome 2, complete sequenceisochorismatase hydrolase2e-0652
NC_020829:940692:983201983201983788588Pseudomonas denitrificans ATCC 13867, complete genomeisochorismatase hydrolase2e-0652
NC_015727:1357095:137110813711081371692585Cupriavidus necator N-1 plasmid BB1p, complete sequenceisochorismatase hydrolase8e-0650.1