Pre_GI: BLASTP Hits

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Query: NC_012582:882931:884615 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Start: 884615, End: 885298, Length: 684

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:859492:859492859492860175684Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-107389
NC_016445:338288:339972339972340655684Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-107389
NC_012668:2744393:280064828006482801331684Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-107389
NC_012578:818241:819925819925820608684Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein1e-107389
NC_009457:351512:353196353196353879684Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-107389
NC_002505:860789:862473862473863156684Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-107389
NC_014966:1668822:167100016710001671695696Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein2e-42172
NC_012918:2668031:267653426765342677220687Geobacter sp. M21 chromosome, complete genomepermease6e-42170