Pre_GI: BLASTP Hits

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Query: NC_012582:272320:303179 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Start: 303179, End: 304417, Length: 1239

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:238580:2707082707082719461239Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0796
NC_002505:238569:2706972706972719351239Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0796
NC_009457:2764972:2795831279583127970691239Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0796
NC_012578:224559:2554242554242566621239Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0796
NC_012668:368305:3683053683053695431239Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0796
NC_016445:2663837:2694704269470426959421239Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0796
NC_015633:461143:4826344826344838691236Vibrio anguillarum 775 chromosome chromosome I, complete sequencemechanosensitive ion channel2e-175615
NC_016745:123772:1354681354681367601293Oceanimonas sp. GK1 chromosome, complete genomemechanosensitive ion channel protein MscS1e-127456
NC_016612:2902628:2920103292010329213471245Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative transport8e-127454
NC_010694:1250841:1255134125513412563781245Erwinia tasmaniensis, complete genomeSmall-conductance mechanosensitive channel9e-126450
NC_020063:3352516:3362711336271133639581248Enterobacteriaceae bacterium strain FGI 57, complete genomesmall-conductance mechanosensitive channel2e-124446
NC_012214:1355500:1358722135872213599661245Erwinia pyrifoliae Ep1/96, complete genomeSmall-conductance mechanosensitive channel6e-124444
NC_009348:3819271:3837685383768538389351251Aeromonas salmonicida subsp. salmonicida A449, complete genomemechanosensitive ion channel2e-123442
NC_011149:588895:6085246085246097711248Salmonella enterica subsp. enterica serovar Agona str. SL483,transporter, small conductance mechanosensitive ion channel4e-123441
NC_011205:645591:6706376706376718841248Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853small conductance mechanosensitive ion channel transporter6e-123441
NC_003198:598000:6172636172636185101248Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-123441
NC_011083:654479:6740656740656753121248Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transporter, small conductance mechanosensitive ion channel8e-123440
NC_016856:606742:6263296263296275761248Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein8e-123440
NC_016863:606742:6263286263286275751248Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein8e-123440
NC_011080:610428:6300426300426312891248Salmonella enterica subsp. enterica serovar Newport str. SL254,transporter, small conductance mechanosensitive ion channel1e-122439
NC_006905:651732:6757876757876770341248Salmonella enterica subsp. enterica serovar Choleraesuis strputative transport1e-122439
NC_015761:520858:5402615402615415081248Salmonella bongori NCTC 12419, complete genomehypothetical protein5e-122437
NC_016845:1407339:1423272142327214245161245Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative transport3e-121435
NC_009436:1141376:1165396116539611666401245Enterobacter sp. 638, complete genomeMscS mechanosensitive ion channel1e-120433
NC_008570:4009762:4025707402570740269481242Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomemechanosensitive ion channel3e-117422
NC_015172:1195782:1194533119453311957891257Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMscS Mechanosensitive ion channel3e-95348
NC_014633:339181:3391813391813404401260Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemechanosensitive ion channel MscS1e-92340
NC_004578:1719849:1734733173473317360431311Pseudomonas syringae pv. tomato str. DC3000, complete genomemechanosensitive ion channel family protein2e-87323
NC_007005:4515853:4520428452042845217201293Pseudomonas syringae pv. syringae B728a, complete genomeMscS Mechanosensitive ion channel1e-87323
NC_009512:1518113:1546509154650915478101302Pseudomonas putida F1, complete genomeMscS Mechanosensitive ion channel9e-87320
NC_006138:225832:2264262264262276761251Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-80299
NC_013222:1659619:1662288166228816635411254Robiginitalea biformata HTCC2501, complete genomeputative membrane transport protein1e-78294
NC_015496:1590674:1608080160808016093571278Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeMscS Mechanosensitive ion channel9e-71267
NC_016001:1893685:1912584191258419138371254Flavobacterium branchiophilum, complete genomeputative small-conductance mechanosensitive ion channel MscS29e-70264
NC_004663:1983439:1998220199822019993951176Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein4e-66252
NC_016776:3626541:3629214362921436303831170Bacteroides fragilis 638R, complete genomehypothetical protein3e-61236
NC_003228:3582728:3583747358374735849161170Bacteroides fragilis NCTC 9343, complete genomehypothetical protein3e-61236
NC_007005:4515853:453285545328554533283429Pseudomonas syringae pv. syringae B728a, complete genome6e-29128
NC_014935:711765:7370107370107382781269Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemscs mechanosensitive ion channel6e-0858.9
NC_012559:2854640:2877981287798128790991119Laribacter hongkongensis HLHK9, complete genomeMscS family inner membrane protein ynaI1e-0758.2
NC_011333:1040192:1043492104349210453751884Helicobacter pylori G27 chromosome, complete genomehypothetical protein1e-0758.2
NC_013037:5442131:545479854547985455673876Dyadobacter fermentans DSM 18053, complete genomeMscS Mechanosensitive ion channel4e-0756.2
NC_009512:1518113:152455615245561524735180Pseudomonas putida F1, complete genome6e-0755.8