Pre_GI: BLASTP Hits

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Query: NC_012582:2626786:2636900 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Start: 2636900, End: 2637517, Length: 618

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:2588435:259854725985472599164618Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-118424
NC_016445:2012294:202240620224062023023618Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-118424
NC_012578:2479150:248926424892642489881618Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-118424
NC_002505:2537655:255224925522492552866618Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-118424
NC_008576:4701930:522052205909690Magnetococcus sp. MC-1, complete genomehypothetical protein1e-0859.3
NC_003047:536151:554710554710555357648Sinorhizobium meliloti 1021, complete genomehypothetical protein2e-0755.5
NC_013194:3861409:388006638800663880839774Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein9e-0753.5
NC_016832:3858815:387292638729263873522597Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-0651.2
NC_003198:3881221:389863938986393899235597Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-0651.2