Pre_GI: BLASTP Hits

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Query: NC_012582:2626786:2634294 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Start: 2634294, End: 2635265, Length: 972

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2012294:201979920197992020770972Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA-directed DNA polymerase0656
NC_012668:1036000:104405310440531045024972Vibrio cholerae MJ-1236 chromosome 1, complete sequencereverse transcriptase0656
NC_012578:2479150:248665824866582487629972Vibrio cholerae M66-2 chromosome I, complete sequenceRNA-directed DNA polymerase0656
NC_009457:2095366:210287421028742103845972Vibrio cholerae O395 chromosome 2, complete sequenceRNA-directed DNA polymerase0656
NC_002505:2537655:254964225496422550613972Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA-directed DNA polymerase0656
NC_016944:2588435:259596425959642596911948Vibrio cholerae IEC224 chromosome I, complete sequenceRNA-directed DNA polymerase0640
NC_014837:33014:4546245462464751014Pantoea sp. At-9b chromosome, complete genomeRNA-directed DNA polymerase7e-76284
NC_015663:1356982:1366981136698113679971017Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA-directed DNA polymerase2e-74279
NC_008570:2216736:224228322422832243191909Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative RNA-dependent DNA polymerase6e-72271
NC_015976:2900891:291120929112092912144936Sphingobium sp. SYK-6, complete genomeputative RNA-directed DNA polymerase3e-46186
NC_013456:2984491:298688029868802987845966Vibrio sp. Ex25 chromosome 1, complete genomeputative reverse transcriptase5e-46184
NC_011206:262844:277816277816278763948Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)8e-42171
NC_016620:781995:784689784689785654966Bacteriovorax marinus SJ, complete genomereverse transcriptase5e-27122
NC_009659:892272:9039629039629049751014Janthinobacterium sp. Marseille chromosome, complete genomeRNA-directed DNA polymerase7e-24111
NC_017191:3901914:3912193391219339139561764Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA-directed DNA polymerase4e-23108
NC_017188:3900951:3910501391050139122641764Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA-directed DNA polymerase4e-23108
NC_002516:776787:785969785969786925957Pseudomonas aeruginosa PAO1, complete genomehypothetical protein6e-23108
NC_015510:4674774:4680972468097246832302259Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeRNA-directed DNA polymerase7e-21101
NC_011601:4036590:406150440615044062463960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeRNA-directed DNA polymerase2e-20100
NC_011750:4307166:4329863432986343310261164Escherichia coli IAI39 chromosome, complete genomeputative retron-type reverse transcriptase1e-1997.8
NC_003911:1078949:109420510942051095173969Silicibacter pomeroyi DSS-3, complete genomeRNA-dependent DNA polymerase, putative1e-1997.1
NC_013406:303218:3125503125503142201671Paenibacillus sp. Y412MC10 chromosome, complete genomeRNA-directed DNA polymerase2e-1997.1
NC_010688:3030873:306024630602463061202957Xanthomonas campestris pv. campestris, complete genomeputative reverse transcriptase2e-1997.1
NC_009973:178000:2176542176542194081755Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeRNA-directed DNA polymerase3e-1996.3
NC_002939:1480474:1491977149197714931191143Geobacter sulfurreducens PCA, complete genomeRNA-directed DNA polymerase9e-1994.4
NC_020418:2868000:2883180288318028849131734Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-1893.2
NC_012947:2898179:290244829024482903410963Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRNA-directed DNA polymerase9e-1891.3
NC_018012:1789028:180004918000491801002954Thiocystis violascens DSM 198 chromosome, complete genomeRetron-type reverse transcriptase9e-1891.3
NC_015164:2473496:2477601247760124790611461Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase1e-1790.9
NC_010334:609636:6242056242056253471143Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase4e-1789
NC_013194:634039:6422706422706439851716Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRibonuclease H4e-1789
NC_011883:2826000:2832835283283528346191785Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,RNA-directed DNA polymerase4e-1789
NC_021066:3201500:321332732133273214196870Raoultella ornithinolytica B6, complete genomehypothetical protein9e-1787.8
NC_007347:1:687068707844975Ralstonia eutropha JMP134 chromosome 1, complete sequenceRNA-directed DNA polymerase2e-1686.7
NC_016818:1795576:1804158180415818059991842Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completereverse transcriptase3e-1686.3
NC_013440:1190832:1204684120468412063901707Haliangium ochraceum DSM 14365, complete genomeRibonuclease H3e-1686.3
NC_012880:2778795:278747227874722788422951Dickeya dadantii Ech703, complete genomereverse transcriptase4e-1685.9
NC_016026:2082500:2097240209724020990481809Micavibrio aeruginosavorus ARL-13 chromosome, complete genomereverse transcriptase family protein8e-1684.7
NC_010688:673454:6822916822916839851695Xanthomonas campestris pv. campestris, complete genomeRNA-directed DNA polymerase3e-1582.8
NC_015635:5222000:523243052324305233401972Microlunatus phosphovorus NM-1, complete genomeputative RNA-directed DNA polymerase4e-1582.4
NC_012691:779826:7885707885707896011032Tolumonas auensis DSM 9187, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-1581.6
NC_008313:2685531:270267527026752703667993Ralstonia eutropha H16 chromosome 1, complete sequencereverse transcriptase (RNA-dependent DNA polymerase)9e-1581.3
NC_015496:3256372:3267584326758432686031020Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA-directed DNA polymerase3e-1479.3
NC_010334:609636:620220620220621074855Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1479
NC_006513:286549:2939752939752958941920Azoarcus sp. EbN1, complete genomeprobable RNA-directed DNA polymerase2e-1377
NC_007645:6858465:6858465685846568597991335Hahella chejuensis KCTC 2396, complete genomeRetron-type reverse transcriptase4e-1375.9
NC_020304:3029243:303402230340223034798777Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase4e-1375.9
NC_014562:983398:997923997923998909987Pantoea vagans C9-1 chromosome, complete genomehypothetical protein5e-1375.5
NC_012918:928903:9532789532789544111134Geobacter sp. M21 chromosome, complete genomeRNA-directed DNA polymerase5e-1375.5
NC_007086:2887875:2939736293973629409231188Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA-directed DNA polymerase6e-1375.1
NC_012880:3982383:399147739914773992475999Dickeya dadantii Ech703, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1274.3
NC_007606:3784847:380768838076883808197510Shigella dysenteriae Sd197, complete genomeputative RNA-directed DNA polymerase, msDNA specific5e-1272
NC_005139:1784000:1817712181771218188571146Vibrio vulnificus YJ016 chromosome I, complete sequenceretron-type reverse transcriptase1e-1171.2
NC_012108:2159230:217027321702732171157885Desulfobacterium autotrophicum HRM2, complete genomeRNA-directed DNA polymerase (retron-type reverse transcriptase)4e-1168.9
NC_009438:3019552:3031547303154730326981152Shewanella putrefaciens CN-32 chromosome, complete genomeretron-type reverse transcriptase5e-1168.6
NC_012660:2045398:2084638208463820857861149Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA-directed DNA polymerase2e-1067
NC_015856:3059737:3068580306858030697581179Collimonas fungivorans Ter331 chromosome, complete genomeretron reverse transcriptase4e-1065.9
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase5e-1065.5
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase1e-0964.3
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0964.3
NC_007645:4677965:4684237468423746856251389Hahella chejuensis KCTC 2396, complete genomegroup II intron-encoding maturase1e-0963.9
NC_015164:2961906:2984079298407929854161338Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0963.2
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase7e-0961.6
NC_013223:2609697:2610769261076926121691401Desulfohalobium retbaense DSM 5692, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0961.6
NC_010981:242500:2849612849612863041344Wolbachia pipientis, complete genomeputative reverse transcriptase1e-0860.8
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0860.8
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_013851:3321853:3347636334763633489971362Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0860.1
NC_011060:1288862:1305353130535313065941242Pelodictyon phaeoclathratiforme BU-1, complete genomeRNA-directed DNA polymerase4e-0859.3
NC_002950:2068500:2069615206961520727103096Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas14e-0858.9
NC_019897:128610:1464991464991478901392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase4e-0858.9
NC_019978:1477724:1479685147968514809741290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase1e-0757.4
NC_019978:1477724:1477724147772414790131290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase1e-0757.4
NC_010321:2276000:228183622818362282342507Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeretron-type reverse transcriptase-like protein1e-0757.4
NC_019897:128610:1414831414831428741392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase2e-0756.6
NC_011751:2327014:2339420233942023405201101Escherichia coli UMN026 chromosome, complete genomeputative Retron-type reverse transcriptase3e-0756.2
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein4e-0755.8
NC_004193:79588:8221182211834701260Oceanobacillus iheyensis HTE831, complete genomerecombinase for Bh.Int6e-0755.5
NC_011059:2272747:2285752228575222869931242Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-0755.5
NC_010729:2147268:2149419214941921517072289Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein6e-0755.5
NC_018645:2390032:2397530239753023988701341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.5
NC_018645:2390032:2405637240563724069771341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2395599239559923969391341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2393152239315223944921341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:3029785:3047408304740830487481341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2399461239946124008011341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1