Pre_GI: BLASTP Hits

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Query: NC_012580:353273:362663 Vibrio cholerae M66-2 chromosome II, complete sequence

Start: 362663, End: 362908, Length: 246

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:324519:334174334174334419246Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-33140
NC_016446:49618:592715927159516246Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-33140
NC_002506:324552:334206334206334451246Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-33140
NC_013960:2592389:259888225988822599508627Nitrosococcus halophilus Nc4 chromosome, complete genomehypothetical protein5e-2096.3
NC_007484:79413:891448914489413270Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein1e-1995.1
NC_013173:2884887:288738028873802887640261Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein1e-1891.3
NC_011883:269497:280833280833281087255Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein2e-1167.8
NC_020409:1328875:134698113469811347184204Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein5e-0856.6
NC_008751:1762562:178515017851501785392243Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehelix-turn-helix protein, CopG family4e-0753.5