Pre_GI: BLASTP Hits

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Query: NC_012580:207025:229340 Vibrio cholerae M66-2 chromosome II, complete sequence

Start: 229340, End: 230314, Length: 975

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:207089:229393229393230367975Vibrio cholerae IEC224 chromosome II, complete sequencesugar ABC transporter ATPase0663
NC_016446:979884:100218810021881003162975Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeABC-type sugar transport system ATPase component0663
NC_012583:242760:2642132642132652621050Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein0662
NC_002506:207097:2293382293382303871050Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein0662
NC_013173:2261396:226648522664852267468984Desulfomicrobium baculatum DSM 4028, complete genomeABC-type sugar transport system, ATPase component1e-51204
NC_009092:179226:192893192893193870978Shewanella loihica PV-4, complete genomehypothetical protein5e-48191
NC_007498:1072112:1076128107612810778731746Pelobacter carbinolicus DSM 2380, complete genomesensory box histidine kinase1e-1894.4
NC_017192:88940:1061581061581083502193Arcobacter sp. L, complete genometwo-component sensor kinase5e-1892
NC_012796:2757500:2774330277433027753581029Desulfovibrio magneticus RS-1, complete genomehypothetical protein8e-1788.2
NC_011769:2248902:2272085227208522756603576Desulfovibrio vulgaris str. 'Miyazaki F', complete genomemulti-sensor hybrid histidine kinase2e-1169.7
NC_015730:1918000:1921336192133619223731038Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein1e-1067.4
NC_008741:81914:8288382883840881206Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,hypothetical protein2e-1066.6
NC_009925:3344894:3361646336164633645402895Acaryochloris marina MBIC11017, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor7e-0961.6
NC_012997:2367400:2385626238562623867201095Teredinibacter turnerae T7901, complete genomehypothetical protein8e-0961.6
NC_020409:1407857:1440551144055114432172667Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Sensor histidine kinase response regulator2e-0860.1
NC_007498:1072112:1091829109182910950203192Pelobacter carbinolicus DSM 2380, complete genomesensory box/FOG: EAL domain/GGDEF domain containing protein1e-0757.4
NC_010814:3332088:3332088333208833347842697Geobacter lovleyi SZ, complete genomemulti-sensor hybrid histidine kinase5e-0652.4