Pre_GI: BLASTP Hits

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Query: NC_012580:207025:211021 Vibrio cholerae M66-2 chromosome II, complete sequence

Start: 211021, End: 211863, Length: 843

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:207089:211073211073211915843Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-126452
NC_016446:979884:983868983868984710843Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-126452
NC_012667:46432:616566165662498843Vibrio cholerae MJ-1236 chromosome 2, complete genomepotassium channel VIC family2e-126452
NC_002506:207097:211093211093211935843Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completepotassium channel protein, putative2e-126452
NC_013929:7117326:712268371226837123462780Streptomyces scabiei 87.22 chromosome, complete genomeion ABC transporter2e-1790.1
NC_019978:1477724:1498498149849814995081011Halobacteroides halobius DSM 5150, complete genomeK+ transport system, NAD-binding component8e-1477.8
NC_013173:1305916:131315813131581313991834Desulfomicrobium baculatum DSM 4028, complete genomeIon transport protein8e-1374.3
NC_010610:755000:761340761340762074735Lactobacillus fermentum IFO 3956, complete genomehypothetical protein1e-1170.9
NC_021182:2536000:253660625366062537412807Clostridium pasteurianum BC1, complete genomeIon channel1e-1170.5
NC_014408:806720:830129830129830890762Methanothermobacter marburgensis str. Marburg chromosome, completepotassium channel related protein2e-1066.6
NC_015216:742321:742321742321743172852Methanobacterium sp. AL-21 chromosome, complete genomeion transport 2 domain-containing protein2e-1066.6
NC_009720:5046861:5048602504860250497591158Xanthobacter autotrophicus Py2, complete genomecyclic nucleotide-binding protein2e-1066.6
NC_009633:947695:949254949254950039786Alkaliphilus metalliredigens QYMF chromosome, complete genomeIon transport 2 domain-containing protein3e-1066.2
NC_014935:711765:7131957131957147751581Nitratifractor saLSUginis DSM 16511 chromosome, complete genometrka-n domain protein3e-0962.4
NC_009662:837500:8607008607008622801581Nitratiruptor sp. SB155-2, complete genomepotassium channel protein1e-0860.8
NC_015696:220798:250987250987251571585Francisella sp. TX077308 chromosome, complete genomepotassium voltage-gated channel subfamily protein1e-0860.5
NC_010336:607145:609147609147609827681Francisella philomiragia subsp. philomiragia ATCC 25017, completeion transport protein1e-0860.5
NC_020911:4465500:447536944753694476304936Octadecabacter antarcticus 307, complete genomeputative ion channel4e-0858.9
NC_013849:1396051:139882413988241399351528Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein6e-0858.2
NC_011027:1153592:117125711712571172075819Chlorobaculum parvum NCIB 8327, complete genomeIon transport protein2e-0756.6
NC_013791:875224:8952738952738962921020Bacillus pseudofirmus OF4 chromosome, complete genomepotassium channel protein4e-0755.5
NC_020260:1535394:155521315552131556049837Cronobacter sakazakii Sp291, complete genomehypothetical protein5e-0755.1
NC_014507:906960:938626938626939591966Methanoplanus petrolearius DSM 11571 chromosome, complete genomeion transport 2 domain-containing protein1e-0653.9
NC_009778:1477841:149627814962781497144867Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0653.1
NC_011026:2533017:2576809257680925779961188Chloroherpeton thalassium ATCC 35110, complete genomeextracellular solute-binding protein family 33e-0652.8
NC_015730:3853065:387904038790403879825786Roseobacter litoralis Och 149 chromosome, complete genomeputative ion channel4e-0652.4
NC_003552:2502689:252696025269602527799840Methanosarcina acetivorans C2A, complete genomepotassium channel protein7e-0651.6