Pre_GI: BLASTP Hits

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Query: NC_012578:224559:246543 Vibrio cholerae M66-2 chromosome I, complete sequence

Start: 246543, End: 246623, Length: 81

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2663837:26858232685823268590381Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0858.2
NC_012582:272320:29430629430629438681Vibrio cholerae O395 chromosome chromosome I, complete sequenceIS1004 transposase1e-0858.2
NC_002505:238569:26055526055526063581Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeIS1004 transposase1e-0858.2
NC_002506:370629:428335428335428772438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase4e-0753.5
NC_009456:787322:806473806473806910438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase4e-0753.5
NC_009456:998935:100583210058321006269438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase4e-0753.5
NC_012580:207025:219753219753220190438Vibrio cholerae M66-2 chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_012583:242760:254700254700255137438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_012583:440420:457032457032457469438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_012667:46432:533295332953766438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase4e-0753.5
NC_012667:931390:938381938381938818438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase4e-0753.5
NC_016446:119914:128876128876129313438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase4e-0753.5
NC_016446:979884:992600992600993037438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase4e-0753.5
NC_016945:207089:219805219805220242438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_016945:370471:428154428154428591438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_017269:303500:325369325369325806438Vibrio cholerae LMA3984-4 chromosome II, complete sequenceIS1004 transposase4e-0753.5
NC_002506:207097:219825219825220262438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase4e-0753.5