Pre_GI: BLASTP Hits

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Query: NC_012563:2680246:2692923 Clostridium botulinum A2 str. Kyoto, complete genome

Start: 2692923, End: 2693474, Length: 552

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from a case of infant botulism in Kyoto, Japan in 1978. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2531750:256721125672112567762552Clostridium botulinum F str. 230613 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-74275
NC_009699:2552195:256707225670722567623552Clostridium botulinum F str. Langeland chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-74275
NC_021182:4367736:438307243830724383620549Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family8e-2096.7
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein2e-1685.1
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor1e-1479.7
NC_016048:2734563:275766727576672758377711Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase sigma factor2e-1479
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF5e-1477.4
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor5e-1373.9
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit8e-1373.2
NC_018664:1:9917991710708792Clostridium acidurici 9a chromosome, complete genomeRNA polymerase factor sigma-70 RpoD8e-1373.2
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily8e-1373.2
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1272.8
NC_013159:2913927:292880029288002929600801Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase sigma factor, sigma-70 family1e-1272.8
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor1e-1272.4
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG2e-1271.6
NC_016148:576946:580786580786581376591Thermovirga lienii DSM 17291 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit7e-1270.1
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit8e-1270.1
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor2e-1168.6
NC_014328:1307490:132611813261181326819702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative RNA polymerase sigma-K factor3e-1168.2
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily4e-1167.4
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family4e-1167.4
NC_015312:3675148:372328137232813724171891Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSigB/F/G subfamily RNA polymerase sigma-28 subunit9e-1166.6
NC_014377:1089894:109924110992411099978738Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-1065.5
NC_006582:883922:886206886206886991786Bacillus clausii KSM-K16, complete genomesigma factor B5e-1064.3
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg6e-1063.5
NC_012440:659646:677627677627678256630Persephonella marina EX-H1, complete genomeRNA polymerase sigma factor for flagellar operon2e-0962
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon2e-0961.6
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family2e-0961.6
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)9e-0960.1
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor9e-0959.7
NC_012654:170956:184629184629185513885Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceputative RNA polymerase sigma factor1e-0859.3
NC_010730:1724443:172492517249251725653729Sulfurihydrogenibium sp. YO3AOP1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-0859.3
NC_020291:1389114:139256713925671393274708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-E factor SigE1e-0859.3
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor3e-0857.8
NC_017179:1683199:169289216928921693464573Clostridium difficile BI1, complete genomehypothetical protein9e-0856.6
NC_013315:1679000:168487716848771685449573Clostridium difficile CD196 chromosome, complete genomehypothetical protein9e-0856.6
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)1e-0756.2
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-0756.2
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA1e-0755.8
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0755.5
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige2e-0755.5
NC_017177:192933:210132210132210779648Clostridium difficile BI1, complete genomeSporulation sigma factor SigK2e-0755.5
NC_015222:1127675:112857711285771129293717Nitrosomonas sp. AL212 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-0755.1
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family6e-0753.9
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 41e-0653.1
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA11e-0653.1
NC_014910:4026613:404772340477234048439717Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, flia/whig family2e-0652.4
NC_015422:4395388:441599244159924416708717Alicycliphilus denitrificans K601 chromosome, complete genomeRNA polymerase sigma 28 subunit FliA/WhiG2e-0652.4
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase1e-0652.4
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)2e-0652
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD3e-0651.6
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family3e-0651.6
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0651.6
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0651.6
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-0651.2