Pre_GI: BLASTN Hits

Some Help

Query: NC_012560:3282704 Azotobacter vinelandii DJ, complete genome

Start: 3282704, End: 3300852, Length: 18149

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:32827023282702330085018149Azotobacter vinelandii CA6, complete genome035630BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome0733BLASTN svgBLASTP svg
NC_015856:3536441*3536441356339226952Collimonas fungivorans Ter331 chromosome, complete genome7e-59236BLASTN svgBLASTP svg
NC_008782:14831551483155150744824294Acidovorax sp. JS42, complete genome7e-59236BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome6e-53216BLASTN svgBLASTP svg
NC_013855:89265789265791607423418Azospirillum sp. B510 plasmid pAB510a, complete sequence1e-47198BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome9e-46192BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome2e-43184BLASTN svgBLASTP svg
NC_010725:594500*59450062034925850Methylobacterium populi BJ001, complete genome1e-41178BLASTN svgBLASTP svg
NC_014217:3431878*3431878345778325906Starkeya novella DSM 506 chromosome, complete genome5e-41176BLASTN svgBLASTP svg
NC_010501:4787963*4787963480728619324Pseudomonas putida W619, complete genome2e-40174BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome3e-39170BLASTN svgBLASTP svg
NC_011757:577611*57761160454026930Methylobacterium chloromethanicum CM4, complete genome3e-36161BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome5e-32147BLASTN svgBLASTP svg
NC_010172:632180*63218065846326284Methylobacterium extorquens PA1, complete genome3e-30141BLASTN svgBLASTP svg
NC_011146:1998981*1998981205724258262Geobacter bemidjiensis Bem, complete genome1e-20109BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome1e-20109BLASTN svgBLASTP svg
NC_020209:4312892*4312892435777044879Pseudomonas poae RE*1-1-14, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015684:20007712000771202392823158Oligotropha carboxidovorans OM5 chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_013889:17408581740858176918228325Thioalkalivibrio sp. K90mix chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_013851:26108472610847263605825212Allochromatium vinosum DSM 180 chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_020211:22065002206500222782621327Serratia marcescens WW4, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007776:13407411340741136934828608Synechococcus sp. JA-2-3B'a(2-13), complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019968:1084288*1084288113090746620Prevotella dentalis DSM 3688 chromosome 2, complete sequence3e-0867.9BLASTN svgBLASTP svg
NC_010725:52172605217260524017722918Methylobacterium populi BJ001, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_010508:18985471898547192485126305Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-0867.9BLASTN svgBLASTP svg
NC_007516:13231051323105134891925815Synechococcus sp. CC9605, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013172:95377295377297644022669Brachybacterium faecium DSM 4810, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-0765.9BLASTN svgBLASTP svg
NC_020126:6738959*6738959675803819080Myxococcus stipitatus DSM 14675, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_007643:578808*57880860209923292Rhodospirillum rubrum ATCC 11170, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008025:17687561768756179085022095Deinococcus geothermalis DSM 11300, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012560:32009613200961322539624436Azotobacter vinelandii DJ, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012781:2552723*2552723258830435582Eubacterium rectale ATCC 33656, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012781:700226*70022673549235267Eubacterium rectale ATCC 33656, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020054:943945*94394596979925855Fibrella aestuarina BUZ 2 drat genome2e-0661.9BLASTN svgBLASTP svg
NC_021150:32009593200959322539424436Azotobacter vinelandii CA6, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013858:416000*41600045309937100Azospirillum sp. B510 plasmid pAB510d, complete sequence8e-0660BLASTN svgBLASTP svg
NC_010816:1274702*1274702129873624035Bifidobacterium longum DJO10A, complete genome8e-0660BLASTN svgBLASTP svg
NC_009921:64213876421387644194720561Frankia sp. EAN1pec, complete genome8e-0660BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome8e-0660BLASTN svgBLASTP svg
NC_007963:26449302644930268018935260Chromohalobacter salexigens DSM 3043, complete genome8e-0660BLASTN svgBLASTP svg