Pre_GI: BLASTN Hits

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Query: NC_012490:43000 Rhodococcus erythropolis PR4, complete genome

Start: 43000, End: 68478, Length: 25479

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012490:26600892660089268717227084Rhodococcus erythropolis PR4, complete genome05114BLASTN svgBLASTP svg
NC_018524:4049990*4049990407854328554Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome0662BLASTN svgBLASTP svg
NC_014210:3763940*3763940379109927160Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-178634BLASTN svgBLASTP svg
NC_013510:3324978*3324978334783522858Thermomonospora curvata DSM 43183, complete genome2e-173617BLASTN svgBLASTP svg
NC_019673:67784016778401680115922759Saccharothrix espanaensis DSM 44229 complete genome4e-144519BLASTN svgBLASTP svg
NC_015671:19500811950081197227622196Cellvibrio gilvus ATCC 13127 chromosome, complete genome7e-112412BLASTN svgBLASTP svg
NC_018531:1900619*1900619194181741199Arthrobacter sp. Rue61a chromosome, complete genome4e-92347BLASTN svgBLASTP svg
NC_012704:57437574378631028874Corynebacterium kroppenstedtii DSM 44385, complete genome2e-84321BLASTN svgBLASTP svg
NC_011886:1891077*1891077192459933523Arthrobacter chlorophenolicus A6, complete genome3e-83317BLASTN svgBLASTP svg
NC_008825:32985063298506332293624431Methylibium petroleiphilum PM1, complete genome1e-82315BLASTN svgBLASTP svg
NC_007298:219783*21978324447124689Dechloromonas aromatica RCB, complete genome6e-57230BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-53218BLASTN svgBLASTP svg
NC_006958:17969017969020324523556Corynebacterium glutamicum ATCC 13032, complete genome3e-52214BLASTN svgBLASTP svg
NC_003450:17968917968920317823490Corynebacterium glutamicum ATCC 13032, complete genome3e-52214BLASTN svgBLASTP svg
NC_011992:71710771710774525928153Acidovorax ebreus TPSY, complete genome2e-41178BLASTN svgBLASTP svg
NC_008782:75268675268678696734282Acidovorax sp. JS42, complete genome1e-36163BLASTN svgBLASTP svg
NC_008781:70881170881173249923689Polaromonas naphthalenivorans CJ2, complete genome4e-30141BLASTN svgBLASTP svg
NC_008786:2687688*2687688271388926202Verminephrobacter eiseniae EF01-2, complete genome6e-29137BLASTN svgBLASTP svg
NC_013131:4525075*4525075454912724053Catenulispora acidiphila DSM 44928, complete genome1e-20109BLASTN svgBLASTP svg
NC_015410:61702061702063960722588Pseudomonas mendocina NK-01 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007907:49565004956500499164135142Desulfitobacterium hafniense Y51, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011830:10375201037520107055233033Desulfitobacterium hafniense DCB-2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015387:1278471*1278471129937220902Marinithermus hydrothermalis DSM 14884 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015711:6707878*6707878672709919222Myxococcus fulvus HW-1 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014761:1196669*1196669122024823580Oceanithermus profundus DSM 14977 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006677:2012841*2012841203080417964Gluconobacter oxydans 621H, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015424:26958472695847271872522879Aeromonas veronii B565 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015164:31447453144745316259917855Bacteroides salanitronis DSM 18170 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009439:574437*57443759753523099Pseudomonas mendocina ymp, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015635:3542125*3542125356795325829Microlunatus phosphovorus NM-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015312:2278566*2278566232680848243Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015740:636667*63666765977523109Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_015385:351393*35139337496623574Treponema succinifaciens DSM 2489 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008570:30132633013263304329130029Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013730:27992872799287282116221876Spirosoma linguale DSM 74, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012029:904780*90478093723732458Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg