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Query: NC_012490:2067246 Rhodococcus erythropolis PR4, complete genome

Start: 2067246, End: 2088099, Length: 20854

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:5987000*5987000601614029141Streptomyces avermitilis MA-4680, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013174:650986*65098667158320598Jonesia denitrificans DSM 20603, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014165:597000*59700065256355564Thermobispora bispora DSM 43833 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013159:403918*40391842932125404Saccharomonospora viridis DSM 43017, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_018750:4728870*4728870475950630637Streptomyces venezuelae ATCC 10712, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012803:1839809*1839809185813118323Micrococcus luteus NCTC 2665, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003888:5114147*5114147515215738011Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014666:7641060*7641060766551924460Frankia sp. EuI1c chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg