Pre_GI: BLASTP Hits

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Query: NC_012490:43000:54199 Rhodococcus erythropolis PR4, complete genome

Start: 54199, End: 55074, Length: 876

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020054:4625895:463746246374624638367906Fibrella aestuarina BUZ 2 drat genomeputative adenine-specific DNA-methyltransferase2e-68259
NC_012471:1197534:1258666125866612597001035Streptococcus equi subsp. equi 4047, complete genomemodification DNA methylase6e-51201
NC_009089:1283000:130570513057051306664960Clostridium difficile 630, complete genomemodification DNA methylase1e-50199
NC_017208:1831918:185634018563401857320981Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA methylase N-4/N-63e-47189
NC_011770:1431740:144026814402681441263996Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-62e-46186
NC_007508:1221500:124360012436001244499900Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)3e-46185
NC_009253:897684:919365919365920264900Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-46185
NC_011770:2690501:269578726957872696728942Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-61e-43177
NC_005085:1:717371738069897Chromobacterium violaceum ATCC 12472, complete genomeprobable DNA methyltransferase4e-43175
NC_011979:646518:656035656035656937903Geobacter sp. FRC-32, complete genomeDNA methylase N-4/N-6 domain protein4e-43175
NC_014318:7821227:783277378327737833579807Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase3e-36152
NC_017186:7822448:783281978328197833625807Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase3e-36152
NC_013441:1487058:1499150149915015001871038Gordonia bronchialis DSM 43247, complete genomeDNA methylase N-4/N-6 domain protein4e-34145
NC_010170:1324758:135891913589191359878960Bordetella petrii, complete genomeadenine DNA methyltransferase protein1e-30133
NC_014318:2252417:2263964226396422650011038Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase3e-29129
NC_017186:2252438:2263985226398522650221038Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase3e-29129
NC_016111:4115097:4131951413195141330931143Streptomyces cattleya NRRL 8057, complete genomeDNA methylase N-4/N-62e-29129
NC_008752:585884:607126607126608097972Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA methylase N-4/N-6 domain protein2e-29129
NC_012914:1851102:1877054187705418781301077Paenibacillus sp. JDR-2, complete genomeDNA methylase N-4/N-6 domain protein1e-28126
NC_007973:2888824:2903604290360429047701167Ralstonia metallidurans CH34 chromosome 1, complete sequenceDNA methylase N-4/N-64e-27122
NC_013947:6585847:6613656661365666146571002Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-26117
NC_013235:5127148:5158882515888251599401059Nakamurella multipartita DSM 44233, complete genomeDNA methylase N-4/N-6 domain protein4e-24112
NC_014814:3926676:3931021393102139320791059Mycobacterium sp. Spyr1 chromosome, complete genomeDNA modification methylase4e-24112
NC_007434:1712000:1782557178255717836931137Burkholderia pseudomallei 1710b chromosome I, complete sequenceDNA methylase2e-23109
NC_007650:1192310:1209408120940812105441137Burkholderia thailandensis E264 chromosome II, complete sequencegp564e-23108
NC_014246:1457992:1469749146974914709661218Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative site-specific DNA-methyltransferase1e-22107
NC_012721:2021885:2032511203251120336531143Burkholderia glumae BGR1 chromosome 2, complete genomeDNA methyltransferase3e-22105
NC_013131:8480384:8514006851400685150431038Catenulispora acidiphila DSM 44928, complete genomeDNA methylase N-4/N-6 domain protein3e-21102
NC_011831:2728932:2738415273841527394851071Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein5e-21101
NC_014731:296000:1789178935431755Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeDNA modification methylase6e-21101
NC_014837:3633378:3649961364996136511361176Pantoea sp. At-9b chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1994.4
NC_011769:247202:2560562560562572551200Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeDNA methylase N-4/N-6 domain protein9e-1994.4
NC_007426:1134937:1142848114284811444551608Natronomonas pharaonis DSM 2160, complete genomemodification methylase5e-1685.1
NC_013926:1009718:1012026101202610145752550Aciduliprofundum boonei T469 chromosome, complete genomeDNA methylase N-4/N-6 domain protein6e-1581.6
NC_010831:40000:4454244542458671326Chlorobium phaeobacteroides BS1, complete genomeDNA methylase N-4/N-6 domain protein7e-1581.3
NC_012526:300126:3174953174953185081014Deinococcus deserti VCD115, complete genomeputative DNA methylase2e-1376.6
NC_010556:2328303:2335257233525723367351479Exiguobacterium sibiricum 255-15, complete genomeDNA methylase N-4/N-6 domain protein4e-1375.5
NC_012778:1819559:183252918325291833332804Eubacterium eligens ATCC 27750, complete genomesite-specific DNA-methyltransferase (adenine-specific)6e-1375.1
NC_008212:1295061:1297541129754113005072967Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase1e-1274.3
NC_014318:7821227:783357678335767833956381Amycolatopsis mediterranei U32 chromosome, complete genomesite-specific DNA-methyltransferase1e-1273.9
NC_017186:7822448:783362278336227834002381Amycolatopsis mediterranei S699 chromosome, complete genomesite-specific DNA-methyltransferase1e-1273.9
NC_009767:2866668:2879315287931528804241110Roseiflexus castenholzii DSM 13941, complete genomeDNA methylase N-4/N-6 domain protein1e-1170.9
NC_011831:4043802:4055528405552840566371110Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein2e-1169.7
NC_009255:1250939:130151013015101302361852Burkholderia vietnamiensis G4 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein3e-1169.3
NC_020387:796253:816956816956817669714Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase7e-1168.2
NC_014639:3520874:3530675353067535317571083Bacillus atrophaeus 1942 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1167.8
CP002207:3520874:3530675353067535317571083Bacillus atrophaeus 1942, complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1167.8
NC_011831:4043802:4052982405298240540251044Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein1e-1067
NC_017191:1173989:126964312696431270482840Bacillus amyloliquefaciens XH7 chromosome, complete genomemodification methylase BamHII9e-1064.3
NC_017188:1172181:126806612680661268905840Bacillus amyloliquefaciens TA208 chromosome, complete genomeModification methylase BamHII9e-1064.3
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase1e-0963.9
NC_010067:4149298:416498041649804165864885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0962.8
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase3e-0962.8
NC_013665:2176502:219282221928222193739918Methanocella paludicola SANAE, complete genomeputative DNA methylase3e-0962.4
NC_014314:69872:792407924080220981Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA methylase N-4/N-6 domain-containing protein2e-0860.1
NC_014150:2201251:223851922385192239298780Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-0859.7
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase4e-0858.9
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0858.9
NC_015873:1119500:112830311283031129109807Megasphaera elsdenii DSM 20460, complete genomeDNA (Cytosine-5-)-methyltransferase4e-0858.9
NC_009718:579291:580462580462581316855Fervidobacterium nodosum Rt17-B1, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-0858.5
NC_002578:877609:889774889774890703930Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein5e-0858.5
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase9e-0857.8
NC_008212:1295061:1300720130072013022701551Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase2e-0757
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase2e-0757
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-62e-0756.6
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein2e-0756.6
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-0756.6
NC_007181:1766910:178808617880861788946861Sulfolobus acidocaldarius DSM 639, complete genomemodification methylase3e-0756.2
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase3e-0756.2
NC_011420:36272:4879748797500351239Rhodospirillum centenum SW, complete genomeDNA methylase, putative5e-0755.5
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein6e-0755.1
NC_017082:532000:5490945490945503591266Bradyrhizobium sp. S23321, complete genomehypothetical protein6e-0755.1
NC_015850:1242010:124882812488281249424597Acidithiobacillus caldus SM-1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-0755.1
NC_012491:3736167:3742439374243937437371299Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-0754.7
NS_000195:526983:528804528804529706903Candidatus Cloacamonas acidaminovoransputative Site-specific DNA-methyltransferase (cytosine-N(4)-specific)7e-0754.7
NC_016111:2892391:289888828988882899634747Streptomyces cattleya NRRL 8057, complete genomeDNA methylase7e-0754.7
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-67e-0754.7
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0654.3
NC_015666:3606053:3624377362437736261161740Halopiger xanaduensis SH-6 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-0754.3
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0653.9
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase1e-0653.9
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein2e-0653.5
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase2e-0653.5
NC_020134:1328302:1335275133527513363421068Clostridium stercorarium subsp. stercorarium DSM 8532, completemodification methylase MthZI2e-0653.1
NC_014562:983398:1001266100126610023061041Pantoea vagans C9-1 chromosome, complete genomehypothetical protein3e-0652.8
NC_016906:3006748:3013820301382030152681449Gordonia polyisoprenivorans VH2 chromosome, complete genomemethylase HpaI4e-0652.4
NC_009511:1746631:1754713175471317561641452Sphingomonas wittichii RW1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0652
NC_016025:65923:797457974580689945Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase6e-0651.6