Pre_GI: BLASTP Hits

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Query: NC_012490:3094857:3103754 Rhodococcus erythropolis PR4, complete genome

Start: 3103754, End: 3107254, Length: 3501

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:2068117:2101222210122221046983477Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein01023
NC_008740:637870:6378706378706413583489Marinobacter aquaeolei VT8, complete genomehypothetical protein0985
NC_007722:2954876:2969618296961829731123495Erythrobacter litoralis HTCC2594, complete genomehypothetical protein0969
NC_009429:622359:6330986330986366223525Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein0854
NC_013165:329185:3554363554363588583423Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein0834
NC_007503:2338110:2353447235344723570703624Carboxydothermus hydrogenoformans Z-2901, complete genomeputative restriction enzyme0816
NC_015676:1009298:1021256102125610247413486Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein0791
NC_013165:329185:3520353520353554303396Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein0780
NC_015635:4097711:4110799411079941126971899Microlunatus phosphovorus NM-1, complete genomehypothetical protein0719
NC_008609:2446246:2467245246724524707273483Pelobacter propionicus DSM 2379, complete genometype II restriction enzyme0676
NC_010404:55908:5989659896634293534Acinetobacter baumannii plasmid p3ABAYE, complete sequenceputative restriction enzyme0671
NC_014376:3009403:3020378302037830238903513Clostridium saccharolyticum WM1 chromosome, complete genomeputative restriction enzyme0668
NC_010556:316996:3307423307423342663525Exiguobacterium sibiricum 255-15, complete genomeputative restriction enzyme0661
NC_015381:1558263:1579738157973815833703633Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative restriction enzyme0646
NC_014410:482193:4880854880854916963612Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Eco57I restriction endonuclease0646
NC_007949:121747:1265841265841301263543Polaromonas sp. JS666 plasmid 1, complete sequencetype II restriction enzyme3e-180633
NC_013364:5255700:5255700525570052593743675Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-178627
NC_015437:816719:8254468254468290213576Selenomonas sputigena ATCC 35185 chromosome, complete genomeN-6 DNA methylase1e-175617
NC_011662:317831:3358273358273393303504Thauera sp. MZ1T, complete genometype II restriction enzyme2e-174613
NC_014614:1166009:1177624117762411813073684Clostridium sticklandii, complete genomePredicted type II restriction enzyme, methylase subunit5e-171602
NC_007626:2204767:2221627222162722252233597Magnetospirillum magneticum AMB-1, complete genomeType II restriction enzyme8e-166585
NC_012796:4075583:4095619409561940992753657Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-165583
NC_015697:1295412:1314958131495813185693612Lactobacillus reuteri SD2112 chromosome, complete genomerestriction enzyme3e-164580
NC_015737:1976000:1981091198109119847413651Clostridium sp. SY8519, complete genomehypothetical protein8e-164578
NC_013730:5877879:5899854589985459035133660Spirosoma linguale DSM 74, complete genomeputative restriction enzyme1e-147525
NC_015635:4097711:411452741145274115501975Microlunatus phosphovorus NM-1, complete genomehypothetical protein7e-110399
NC_002939:2315402:2321225232122523250373813Geobacter sulfurreducens PCA, complete genomehypothetical protein7e-92339
NC_015740:2966184:2988779298877929907521974Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-83312
NC_011060:2099255:2127323212732321310483726Pelodictyon phaeoclathratiforme BU-1, complete genomehypothetical protein1e-57225
NC_011891:1278199:1290018129001812939923975Anaeromyxobacter dehalogenans 2CP-1, complete genomehypothetical protein2e-57225
NC_016445:89500:1155251155251192653741Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-57223
NC_015666:252740:2921362921362964614326Halopiger xanaduensis SH-6 chromosome, complete genomehypothetical protein1e-55219
NC_015379:908904:9453479453479491533807Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein2e-54215
NC_010003:1360472:1361955136195513653323378Petrotoga mobilis SJ95, complete genomehypothetical protein6e-54213
NC_015740:2966184:298218329821832982935753Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-52207
NC_013158:1905643:1931651193165119359434293Halorhabdus utahensis DSM 12940, complete genomehypothetical protein8e-50199
NC_014148:3959960:3985649398564939899264278Planctomyces limnophilus DSM 3776 chromosome, complete genomehypothetical protein8e-42173
NC_015136:3127930:3127930312793031313193390Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein5e-37157
NC_015186:491930:5051955051955071171923Acidiphilium multivorum AIU301, complete genomehypothetical protein8e-35150
NC_011004:1174813:1191554119155411955343981Rhodopseudomonas palustris TIE-1, complete genomehypothetical protein8e-34146
NC_013889:1202385:1202385120238512059093525Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein2e-32141
NC_014394:1658357:1658357165835716617013345Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein7e-31137
NC_007760:3692798:3692798369279836961873390Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein5e-31137
NC_007760:3655433:3692798369279836961873390Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein5e-31137
NC_007644:2318855:2340019234001923422142196Moorella thermoacetica ATCC 39073, complete genomehypothetical protein2e-30135
NC_008577:2115440:2147878214787821513423465Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein5e-30134
NC_008346:1117802:1130669113066911327892121Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein2e-28128
NC_018870:2232857:2232857223285722362613405Thermacetogenium phaeum DSM 12270 chromosome, complete genomeputative s-adenosyl-L-methionine-dependent methyltransferase2e-27125
NC_013132:705314:7108107108107134582649Chitinophaga pinensis DSM 2588, complete genomehypothetical protein4e-26121
NC_015186:491930:5031835031835051982016Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-24116
NC_015726:3452232:3472372347237234742791908Cupriavidus necator N-1 chromosome 1, complete sequencetype II restriction enzyme, methylase subunit9e-21103
NC_008346:1117802:112814911281491129078930Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-1483.2
NC_011891:3369170:3379581337958133824332853Anaeromyxobacter dehalogenans 2CP-1, complete genomeprotein of unknown function DUF4502e-1172.8
NC_010939:405477:4184354184354197601326Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeModification methylase AccI1e-1069.7
NC_013222:1536203:1543931154393115469513021Robiginitalea biformata HTCC2501, complete genometype II restriction enzyme, methylase subunit1e-0862.8