Pre_GI: BLASTP Hits

Some Help

Query: NC_012490:2660089:2678789 Rhodococcus erythropolis PR4, complete genome

Start: 2678789, End: 2679613, Length: 825

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014973:3452100:346695034669503467465516Geobacter sp. M18 chromosome, complete genomeHNH endonuclease6e-1374.7
NC_017190:2130651:215684221568422157525684Bacillus amyloliquefaciens LL3 chromosome, complete genomeHNH endonuclease family protein6e-1271.6
NC_012918:1697860:170773517077351708259525Geobacter sp. M21 chromosome, complete genomeHNH endonuclease2e-1169.7
NC_008571:2553849:256822325682232569161939Gramella forsetii KT0803, complete genomeHNH endonuclease family protein2e-1066.6
NC_009256:1253384:126519412651941265736543Burkholderia vietnamiensis G4 chromosome 1, complete sequenceNUMOD4 domain-containing protein4e-1065.5
NC_008530:646207:656615656615657346732Lactobacillus gasseri ATCC 33323, complete genomeHoming nuclease of HNH family with NUMOD4 and IENR domains4e-1065.5
NC_004663:2509433:254343125434312544399969Bacteroides thetaiotaomicron VPI-5482, complete genomeendonuclease1e-0963.5
NC_016052:1839763:185041518504151850951537Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein2e-0859.7
NC_014724:1101950:111980611198061120336531Lactobacillus amylovorus GRL 1112 chromosome, complete genomehoming nuclease3e-0858.9
NC_002758:918827:925683925683926234552Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein3e-0858.9
NC_009782:920272:927128927128927679552Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-0858.9
NC_012984:1027898:103422310342231034789567Lactobacillus plantarum JDM1, complete genomehypothetical protein4e-0858.9
NC_012891:1573435:158158015815801582140561Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative endodeoxyribonuclease4e-0755.5
NC_012121:474144:481699481699482250552Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative HNH-family endonuclease, phage associated9e-0754.3
NC_000964:2146000:215976321597632160284522Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein9e-0650.8