Pre_GI: BLASTP Hits

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Query: NC_012490:2660089:2677860 Rhodococcus erythropolis PR4, complete genome

Start: 2677860, End: 2678510, Length: 651

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:4118355:412587041258704126490621Spirosoma linguale DSM 74, complete genomeResolvase domain protein1e-41169
NC_015311:2059879:208055820805582081169612Prevotella denticola F0289 chromosome, complete genomeresolvase, N-terminal domain-containing protein2e-40165
NC_015500:2866027:290595929059592906588630Treponema brennaborense DSM 12168 chromosome, complete genomeResolvase domain protein2e-40165
NC_020054:4795000:480343348034334804032600Fibrella aestuarina BUZ 2 drat genomeTransposon Tn2501 resolvase1e-38159
NC_003228:3212500:323794832379483238541594Bacteroides fragilis NCTC 9343, complete genomemultiple promoter invertase7e-38157
NC_016776:3258939:327534632753463275939594Bacteroides fragilis 638R, complete genomemultiple promoter invertase7e-38157
NC_006347:3166000:317657831765783177171594Bacteroides fragilis YCH46, complete genomeserinr type site-specific recombinase Mpi4e-38157
NC_006347:3390193:341740434174043418012609Bacteroides fragilis YCH46, complete genomeserine type site-specific recombinase1e-37156
NC_010814:2482848:249321924932192493872654Geobacter lovleyi SZ, complete genomeResolvase domain9e-37153
NC_011565:969198:980212980212980835624Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,serine site-specific recombinase1e-31136
NC_019968:1304450:133413913341391334585447Prevotella dentalis DSM 3688 chromosome 2, complete sequence3e-31135
NC_011979:773673:782603782603783214612Geobacter sp. FRC-32, complete genomeResolvase domain protein7e-31134
NC_007517:3524715:353936435393643539975612Geobacter metallireducens GS-15, complete genomeResolvase-like6e-30130
NC_011565:998000:100686310068631007486624Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,serine site-specific recombinase2e-29129
NC_011979:646518:661582661582662214633Geobacter sp. FRC-32, complete genomeResolvase domain protein6e-29127
NC_005090:1812833:182048618204861821109624Wolinella succinogenes DSM 1740, complete genomeHYPOTHETICAL PROTEIN-Putative Site-specific recombinase7e-21100
NC_018605:846500:861011861011861622612Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeResolvase6e-2097.4
NC_012804:1514533:152386215238621524686825Thermococcus gammatolerans EJ3, complete genomeResolvase, putative7e-1994
NC_013456:2984491:299238029923802992952573Vibrio sp. Ex25 chromosome 1, complete genomeresolvase N-terminal domain protein1e-1893.2
NC_014506:157396:171515171515172183669Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeResolvase domain-containing protein2e-1892
NC_015410:2258800:227344222734422274011570Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-1790.1
NC_015593:2553500:256540025654002565978579Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeResolvase domain-containing protein2e-1685.9
NC_007434:1322500:134103513410351341610576Burkholderia pseudomallei 1710b chromosome I, complete sequencetransposon Tn2501 resolvase2e-1685.9
NC_015381:3607626:361913336191333619708576Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposon Tn2501 resolvase2e-1685.5
NC_009074:94000:102912102912103490579Burkholderia pseudomallei 668 chromosome I, complete sequenceresolvase, N-terminal:Resolvase helix-turn-helix region4e-1684.7
NC_014801:1:215732157322187615Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,cpp279e-1683.6
NC_010508:2776283:278807327880732788648576Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceResolvase domain2e-1582.8
NC_012724:3222415:323478532347853235360576Burkholderia glumae BGR1 chromosome 1, complete genomeResolvase2e-1582.4
NC_015633:2801321:280895428089542809553600Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein3e-1582
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete4e-1581.3
NC_009256:458649:476097476097476684588Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein5e-1580.9
NC_008542:2631138:264083826408382641416579Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceResolvase, N-terminal domain8e-1580.5
NC_008060:1945597:195529719552971955875579Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceResolvase-like8e-1580.5
NC_016616:760145:771982771982772542561Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin1e-1479.7
NC_014963:113015:129583129583130182600Terriglobus saanensis SP1PR4 chromosome, complete genomeResolvase domain-containing protein1e-1479.7
NC_015136:1301576:130993413099341310527594Burkholderia sp. CCGE1001 chromosome 1, complete sequenceresolvase2e-1479
NC_005773:4797242:481127048112704811839570Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-1478.2
NC_012969:1574330:158524815852481585832585Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeResolvase domain-containing protein5e-1477.8
NC_015576:1442713:146084114608411461422582Mycobacterium sp. JDM601 chromosome, complete genomesite-specific recombinase PinR5e-1477.8
NC_004757:905417:914348914348914908561Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase5e-1477.8
NC_008782:1863853:187305118730511873632582Acidovorax sp. JS42, complete genomeResolvase, N-terminal domain9e-1477
NC_013421:3752619:375992837599283760485558Pectobacterium wasabiae WPP163, complete genomeResolvase domain protein8e-1477
NC_007946:289425:302117302117302680564Escherichia coli UTI89, complete genomeputative resolvase8e-1477
NC_009052:2512373:251582725158272516417591Shewanella baltica OS155, complete genomeResolvase, N-terminal domain1e-1376.6
NC_015733:4130000:414638341463834146976594Pseudomonas putida S16 chromosome, complete genometransposon resolvase1e-1376.6
NC_008740:443274:465549465549466109561Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain1e-1376.3
NC_010622:2385932:239489423948942395490597Burkholderia phymatum STM815 chromosome 1, complete sequenceResolvase domain protein2e-1375.9
NC_018080:3088866:309182730918273092387561Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein2e-1375.9
NC_011353:5426793:542679354267935427431639Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeresolvase TnpR2e-1375.9
NC_012752:1:673267327292561Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative resolvase HDEF_p00073e-1375.5
NC_002655:5382557:538321153832115383786576Escherichia coli O157:H7 EDL933, complete genomeputative resolvase2e-1375.5
NC_002695:5352554:535320853532085353783576Escherichia coli O157:H7 str. Sakai, complete genomeputative resolvase2e-1375.5
NC_013008:5382917:538291753829175383492576Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeresolvase2e-1375.5
NC_015761:2373967:237824623782462378818573Salmonella bongori NCTC 12419, complete genomeDNA-invertase4e-1374.7
NC_016846:24500:256552565526215561Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,Tn4653 resolvase4e-1374.7
NC_007650:2429307:244797324479732448641669Burkholderia thailandensis E264 chromosome II, complete sequenceTransposon Tn2501 resolvase5e-1374.7
NC_003384:109036:122365122365122922558Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidresolvase5e-1374.7
NC_008344:1364142:137394513739451374502558Nitrosomonas eutropha C91, complete genomeResolvase, N-terminal domain5e-1374.7
NC_008341:29038:398433984340400558Nitrosomonas eutropha C91 plasmid1, complete sequenceResolvase, N-terminal domain5e-1374.7
NC_009140:121107:124082124082124699618Salmonella enterica enterica sv Newport str. SL254, complete6e-1374.3
NC_009445:6621996:665476866547686655373606Bradyrhizobium sp. ORS 278 chromosome, complete genometransposon Tn21 resolvase5e-1374.3
NC_014841:248487:263402263402263989588Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceResolvase domain protein5e-1374.3
NC_006363:36959:478534785348404552Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative resolvase8e-1373.9
NC_008609:1976403:206462720646272065184558Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain8e-1373.9
NC_010002:2933909:295119029511902951747558Delftia acidovorans SPH-1, complete genomeResolvase domain8e-1373.9
NC_015740:1291739:129359212935921294155564Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTnAtcArs resolvase9e-1373.6
NC_006351:520500:532668532668533243576Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransposon Tn2501 resolvase1e-1273.6
NC_015733:5909821:592850459285045929064561Pseudomonas putida S16 chromosome, complete genomeTn501 transposition resolvase1e-1273.2
NC_008781:4178115:419245341924534193028576Polaromonas naphthalenivorans CJ2, complete genomeResolvase, N-terminal domain1e-1273.2
NC_008463:1293079:130641013064101306970561Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative resolvase, essential for transposition1e-1273.2
NC_017208:694500:711042711042711614573Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA integration/recombination/inversion protein1e-1273.2
NC_010693:1:642664267031606Erwinia tasmaniensis plasmid pET46, complete sequenceResolvase2e-1272.8
NC_008740:257434:278266278266278829564Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain2e-1272.8
NC_008268:3335035:334145233414523341988537Rhodococcus sp. RHA1, complete genomeresolvase2e-1272.8
NC_009349:78000:972929729297852561Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTnpR resolvase2e-1272.8
NC_008573:195317:209233209233209793561Shewanella sp. ANA-3 plasmid 1, complete sequenceResolvase, N-terminal domain protein2e-1272.8
NC_016860:4055117:407155640715564072116561Salmonella enterica subsp. enterica serovar Typhimurium strtransposon Tn21 resolvase TnpR2e-1272.8
NC_017328:1075535:111282011128201113380561Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn21 resolvase2e-1272.8
NC_011415:644811:652676652676653266591Escherichia coli SE11 chromosome, complete genomeputative phage resolvase2e-1272.4
NC_010545:11950:274182741827957540Corynebacterium urealyticum DSM 7109, complete genomeputative resolvase2e-1272.4
NC_021182:1911088:192520819252081925777570Clostridium pasteurianum BC1, complete genomesite-specific recombinase, DNA invertase Pin3e-1272
NC_020908:1472981:148177214817721482320549Octadecabacter arcticus 238, complete genomeDNA integration/recombination/inversion protein3e-1272
NC_008711:424482:432246432246432848603Arthrobacter aurescens TC1, complete genomesite-specific recombinase, resolvase family4e-1271.2
NC_006625:63342:812898128981846558Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceresolvase domain-containing protein5e-1271.2
NC_008345:4107847:411968141196814120238558Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein5e-1271.2
NC_013364:1596278:160503916050391605587549Escherichia coli O111:H- str. 11128, complete genomeputative site-specific recombinases5e-1271.2
NC_004431:3012668:302138630213863021976591Escherichia coli CFT073, complete genomePutative DNA-invertase from lambdoid prophage Rac6e-1270.9
NC_012947:2189533:219887621988762199466591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase6e-1270.9
NC_012967:1593101:160138716013871601977591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase6e-1270.9
NC_013173:953633:967010967010967573564Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein1e-1170.1
NC_013456:2528284:253422625342262534834609Vibrio sp. Ex25 chromosome 1, complete genomeresolvase putative1e-1170.1
NC_011886:1035500:104683710468371047421585Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein1e-1169.7
NC_012759:1517500:152370515237051524295591Escherichia coli BW2952 chromosome, complete genomeQin prophage; putative site-specific recombinase2e-1169.3
AC_000091:1627049:163533616353361635926591Escherichia coli W3110 DNA, complete genomepredicted site-specific recombinase2e-1169.3
NC_000913:1625500:163164616316461632236591Escherichia coli K12, complete genomeQin prophage; predicted site-specific recombinase2e-1169.3
NC_010473:1712984:172127117212711721861591Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted site-specific recombinase2e-1169.3
NC_009921:5681677:569052656905265691095570Frankia sp. EAN1pec, complete genomeResolvase domain2e-1169.3
NC_012967:1403733:142469014246901425280591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase2e-1169.3
NC_012947:2366000:237314923731492373739591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase2e-1169.3
NC_012880:3529017:354256735425673543136570Dickeya dadantii Ech703, complete genomeResolvase domain protein3e-1168.6
NC_015160:3556114:355965335596533560171519Odoribacter splanchnicus DSM 20712 chromosome, complete genomeResolvase domain3e-1168.6
AP010958:604719:612436612436613026591Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted site-specific recombinase3e-1168.6
NC_013353:604719:612436612436613026591Escherichia coli O103:H2 str. 12009, complete genomesite-specific recombinase3e-1168.6
NC_007274:72979:892548925489865612Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completeDNA invertase4e-1168.2
NC_011886:177039:188420188420188986567Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein4e-1168.2
NC_008347:1636660:164962816496281650176549Maricaulis maris MCS10, complete genomeResolvase4e-1168.2
NC_007606:1209132:121813312181331218684552Shigella dysenteriae Sd197, complete genomeDNA invertase-like protein5e-1167.8
NC_014828:107802:113308113308113874567Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain6e-1167.8
NC_014828:501342:515018515018515584567Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain6e-1167.8
NC_012108:2037429:204296020429602043565606Desulfobacterium autotrophicum HRM2, complete genomeResR7e-1167.4
NC_007298:3764048:377307737730773773631555Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal:Resolvase helix-turn-helix region6e-1167.4
NC_021150:4350461:435918743591874359756570Azotobacter vinelandii CA6, complete genomeResolvase-like protein8e-1167
NC_012560:4350465:435919143591914359760570Azotobacter vinelandii DJ, complete genomeResolvase-like protein8e-1167
NC_016822:1304398:131125113112511311802552Shigella sonnei 53G, complete genomeresolvase8e-1167
NC_007384:1320287:132840713284071328958552Shigella sonnei Ss046, complete genomeputative resolvase8e-1167
NC_007298:1418500:142663114266311427194564Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal:Resolvase helix-turn-helix region1e-1066.6
NC_011758:247666:249897249897250493597Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeResolvase domain1e-1066.6
NC_010172:798923:813860813860814405546Methylobacterium extorquens PA1, complete genomeResolvase domain1e-1066.6
NC_008609:1394377:139971913997191400297579Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain2e-1066.2
NC_009712:669647:688748688748689350603Candidatus Methanoregula boonei 6A8, complete genomeresolvase domain-containing protein2e-1066.2
NC_012559:1635922:165037916503791650963585Laribacter hongkongensis HLHK9, complete genomeTransposon Tn2501 resolvase2e-1065.9
NC_014311:1635408:165529016552901655868579Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific DNA recombinase; e14 prophage2e-1065.5
NC_008538:46469:550515505155671621Arthrobacter sp. FB24 plasmid 2, complete sequenceResolvase-like protein2e-1065.5
NC_018678:1820390:183113018311301831720591Alteromonas macleodii str. 'English Channel 673' chromosome,resolvase3e-1065.1
NC_007384:2007467:202280720228072023358552Shigella sonnei Ss046, complete genomeputative resolvase3e-1065.1
NC_008752:3217695:323449732344973235420924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain4e-1065.1
NC_008752:2936933:296832429683242969247924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain4e-1065.1
NC_009092:4585784:459390045939004594484585Shewanella loihica PV-4, complete genomeResolvase, N-terminal domain4e-1065.1
NC_015145:92397:117011117011117577567Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomesite-specific recombinase, DNA invertase Pin5e-1064.7
NC_009074:2914053:292983329298332930444612Burkholderia pseudomallei 668 chromosome I, complete sequenceputative site-specific recombinases, DNA invertase Pin4e-1064.7
NC_013165:2240377:227107522710752271659585Slackia heliotrinireducens DSM 20476, complete genomesite-specific recombinase, DNA invertase Pin4e-1064.7
NC_015740:2614317:262086026208602621420561Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-1064.7
NC_011892:352652:369639369639370199561Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete7e-1063.9
NC_007651:3560652:357357235735723574225654Burkholderia thailandensis E264 chromosome I, complete sequenceresolvase TnpR9e-1063.5
NC_015146:144565:148300148300148878579Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completesite-specific recombinase, DNA invertase Pin9e-1063.5
NC_014550:3377834:342306334230633423647585Arthrobacter arilaitensis Re117, complete genomeputative resolvase1e-0963.2
NC_021066:3201500:321098232109823211554573Raoultella ornithinolytica B6, complete genomesite-specific recombinase, DNA invertase Pin1e-0963.2
NC_015259:673662:684998684998685570573Polymorphum gilvum SL003B-26A1 chromosome, complete genomeInvertase recombinase-like protein2e-0962.8
NC_009342:589741:594029594029594808780Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-0962.8
NC_010172:280092:291402291402291947546Methylobacterium extorquens PA1, complete genomeResolvase domain2e-0962.8
NC_007507:101887:117717117717118640924Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5045 resolvase1e-0962.8
NC_015730:1107840:112029511202951120915621Roseobacter litoralis Och 149 chromosome, complete genomebacteriophage DNA-invertase2e-0962.4
NC_003197:2894344:291484229148422915414573Salmonella typhimurium LT2, complete genomeDNA-invertase Hin4e-0961.6
NC_016856:2896630:293507729350772935649573Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-invertase Hin4e-0961.6
NC_016860:2917910:293840829384082938980573Salmonella enterica subsp. enterica serovar Typhimurium strDNA-invertase Hin4e-0961.6
NC_016863:2844883:288333028833302883902573Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-invertase Hin4e-0961.6
NC_011080:2870428:289148128914812892047567Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA-invertase hin3e-0961.6
NC_010611:240839:255477255477255962486Acinetobacter baumannii ACICU, complete genomesite-specific recombinase, DNA invertase Pin protein5e-0961.2
NC_011586:268927:317739317739318224486Acinetobacter baumannii AB0057 chromosome, complete genomeinvertase/recombinase protein5e-0961.2
NC_015955:1:303313033131038708Halophilic archaeon DL31 plasmid phalar01, complete sequenceResolvase domain-containing protein5e-0961.2
NC_009956:88354:971909719097789600Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceresolvase domain-containing protein5e-0961.2
NC_011083:2847318:288963028896302890193564Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-invertase hin9e-0960.5
NC_011094:2791719:282196128219612822533573Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-invertase hin9e-0960.5
NC_012856:2266187:227986322798632280453591Ralstonia pickettii 12D chromosome 1, complete genomeResolvase domain protein9e-0960.5
NC_015376:2061990:206887020688702069424555Burkholderia gladioli BSR3 chromosome chromosome 2, completeResolvase domain protein8e-0960.5
NC_010102:2862178:287925728792572879829573Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0960.5
NC_015671:3093596:310276731027673103396630Cellvibrio gilvus ATCC 13127 chromosome, complete genomeResolvase domain-containing protein8e-0960.5
NC_008009:5044612:506334850633485063953606Acidobacteria bacterium Ellin345, complete genomeResolvase-like1e-0860.1
NC_008009:5044612:505263750526375053242606Acidobacteria bacterium Ellin345, complete genomeResolvase-like1e-0860.1
NC_009720:2489003:250632625063262506877552Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein1e-0860.1
NC_013791:875224:877866877866878429564Bacillus pseudofirmus OF4 chromosome, complete genomeresolvase1e-0860.1
NC_013893:1723939:172458317245831725176594Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeResolvase/integrase Bin1e-0860.1
NC_002689:1548000:155904915590491559654606Thermoplasma volcanium GSS1, complete genomeSite-specific recombinase, DNA invertase Pin-related1e-0860.1
NC_017208:1831918:186507618650761865639564Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-Invertase BINR (Transposon TN552)2e-0859.7
NC_015671:255808:266131266131266709579Cellvibrio gilvus ATCC 13127 chromosome, complete genomeResolvase domain-containing protein1e-0859.7
NC_008702:815264:829733829733830302570Azoarcus sp. BH72, complete genomeputative resolvase1e-0859.7
NC_009838:81913:945989459895077480Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencerecombinase1e-0859.7
NC_006350:1938631:197529319752931975937645Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative recombinase1e-0859.7
NC_007519:2773000:279269727926972793263567Desulfovibrio alaskensis G20 chromosome, complete genomeputative resolvase1e-0859.7
NC_002516:4321000:433032143303214330896576Pseudomonas aeruginosa PAO1, complete genomeprobable DNA invertase1e-0859.7
NC_015160:231276:238844238844239473630Odoribacter splanchnicus DSM 20712 chromosome, complete genomeResolvase domain1e-0859.7
NC_007519:1782067:179265117926511793217567Desulfovibrio alaskensis G20 chromosome, complete genomeputative resolvase2e-0859.3
NC_008268:3335035:334792433479243348859936Rhodococcus sp. RHA1, complete genomepossible resolvase, N-terminal2e-0859.3
NC_009720:1248866:126996712699671270605639Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein3e-0858.9
NC_006873:1:129129722594Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequenceputative resolvase/DNA invertase3e-0858.9
NC_007777:2638580:264382526438252644376552Frankia sp. CcI3, complete genomeResolvase-like2e-0858.9
NC_006663:1:504250425620579Staphylococcus epidermidis RP62A plasmid pSERP, complete sequencesite-specific recombinase, resolvase family2e-0858.9
NC_010511:7400255:741977274197727420377606Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein2e-0858.9
NC_016027:1776300:177822117782211778796576Gluconacetobacter xylinus NBRC 3288, complete genomeDNA resolvase3e-0858.5
NC_008820:1766973:178531017853101785945636Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein3e-0858.5
NC_019771:2461000:247410324741032474672570Anabaena cylindrica PCC 7122, complete genomeResolvase domain protein3e-0858.5
NC_019774:74131:833278332783896570Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceResolvase domain protein3e-0858.5
NC_009342:135500:153413153413154030618Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-0858.5
NC_014006:850763:883044883044883589546Sphingobium japonicum UT26S chromosome 1, complete genomeinvertase/recombinase like protein5e-0858.2
NC_016616:2644883:264743926474392648053615Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin4e-0858.2
NC_009350:137645:149139149139149753615Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeTniR protein4e-0858.2
NC_017986:1885613:188561318856131886236624Pseudomonas putida ND6 chromosome, complete genomeTniR protein4e-0858.2
NC_007426:1134937:114106711410671141822756Natronomonas pharaonis DSM 2160, complete genomeresolvase4e-0858.2
NC_017986:1862408:188038418803841881025642Pseudomonas putida ND6 chromosome, complete genomeputative resolvase4e-0858.2
NC_007512:944941:972563972563973159597Pelodictyon luteolum DSM 273, complete genomeinvertase/recombinase like protein6e-0857.8
NC_015420:35384:328132813877597Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completeResolvase domain protein6e-0857.8
NC_017150:853708:858568858568859134567Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase5e-0857.8
NC_013757:1438812:145034114503411450970630Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein5e-0857.8
NC_017249:8510121:853227585322758532970696Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0857.8
NC_018000:1207231:120989412098941210463570Sinorhizobium fredii USDA 257 chromosome, complete genometransposon Tn552 DNA-invertase BinR8e-0857.4
NC_011662:2402408:242481724248172425392576Thauera sp. MZ1T, complete genomeResolvase domain protein8e-0857.4
NC_006905:2857699:286979628697962870368573Salmonella enterica subsp. enterica serovar Choleraesuis strH inversion: regulation of flagellar gene expression by site-specific inversion of DNA7e-0857.4
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase7e-0857.4
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase7e-0857.4
NC_009656:5475540:549848254984825498871390Pseudomonas aeruginosa PA7 chromosome, complete genometransposon Tn21 resolvase7e-0857.4
NC_016938:193000:195050195050195646597Melissococcus plutonius DAT561 chromosome 1, complete genomeDNA-invertase7e-0857.4
NC_016624:112919:112919112919113497579Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencesite-specific DNA recombinase, ISAli20, Tn3 family6e-0857.4
NC_017187:937649:940704940704941330627Arcobacter butzleri ED-1, complete genomeresolvase1e-0757
NC_010181:31749:371613716137703543Bacillus weihenstephanensis KBAB4 plasmid pBWB402, completeResolvase domain1e-0757
NC_003888:4750489:476711547671154767627513Streptomyces coelicolor A3(2), complete genomeDNA invertase9e-0857
NC_009720:583060:605232605232605843612Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein9e-0857
NC_011663:2123388:213600421360042136555552Shewanella baltica OS223 chromosome, complete genomeresolvase domain-containing protein9e-0857
NC_014550:3316115:333747333374733338141669Arthrobacter arilaitensis Re117, complete genomeputative resolvase8e-0857
NC_010511:7024412:703913270391327039689558Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein1e-0756.6
NC_009656:115390:116395116395117324930Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-0756.6
NC_008712:250240:256259256259256807549Arthrobacter aurescens TC1 plasmid TC1, complete sequenceDNA-invertase (Site-specific recombinase resolvase family)1e-0756.6
NC_013441:1487058:149085514908551491550696Gordonia bronchialis DSM 43247, complete genomeResolvase domain protein1e-0756.6
NC_011667:1:105081050811122615Thauera sp. MZ1T plasmid pTha01, complete sequenceResolvase domain protein1e-0756.6
NC_010511:915313:926278926278926835558Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein1e-0756.6
NC_008541:472643:491091491091491672582Arthrobacter sp. FB24 chromosome 1, complete sequenceResolvase1e-0756.6
NC_016818:859181:868333868333868899567Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase, DNA invertase Pin2e-0756.2
NC_009850:972692:975747975747976373627Arcobacter butzleri RM4018, complete genomesite-specific recombinase, resolvase family2e-0756.2
NC_014550:889500:914521914521915093573Arthrobacter arilaitensis Re117, complete genomeputative resolvase1e-0756.2
NC_013037:2851940:285981428598142860419606Dyadobacter fermentans DSM 18053, complete genomeResolvase domain1e-0756.2
NC_003277:22257:367613676137321561Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative resolvase1e-0756.2
NC_009997:3483157:349435334943533494919567Shewanella baltica OS195, complete genomeResolvase domain2e-0755.8
NC_009997:2585588:259047825904782591044567Shewanella baltica OS195, complete genomeResolvase domain2e-0755.8
NC_016901:2542110:254979425497942550360567Shewanella baltica OS678 chromosome, complete genomeResolvase domain2e-0755.8
NC_011894:5468500:548154454815445482101558Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein2e-0755.8
NC_011658:4866184:488593948859394886499561Bacillus cereus AH187 chromosome, complete genomeDNA-invertase hin2e-0755.8
NC_016771:4821000:483826248382624838822561Bacillus cereus NC7401, complete genomeputative resolvase2e-0755.8
NC_013716:5201097:521190952119095212505597Citrobacter rodentium ICC168, complete genomeputative site-specific DNA recombinase2e-0755.8
NC_008380:2287327:228814422881442288707564Rhizobium leguminosarum bv. viciae 3841, complete genomeputative DNA-invertase2e-0755.8
NC_020260:440000:449060449060449671612Cronobacter sakazakii Sp291, complete genomeresolvase3e-0755.5
NC_002695:301939:306891306891307445555Escherichia coli O157:H7 str. Sakai, complete genomeDNA-invertase3e-0755.5
NC_011353:305820:310772310772311326555Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-invertase3e-0755.5
NC_013008:306953:310772310772311326555Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA invertase from prophage CP-933H3e-0755.5
NC_005071:288922:333292333292333927636Prochlorococcus marinus str. MIT 9313, complete genomeSite-specific recombinase2e-0755.5
CP002207:1894500:1900994190099419029851992Bacillus atrophaeus 1942, complete genomeResolvase domain protein4e-0755.1
NC_014639:1894500:1900994190099419029851992Bacillus atrophaeus 1942 chromosome, complete genomeresolvase domain-containing protein4e-0755.1
NC_008712:250240:255446255446256075630Arthrobacter aurescens TC1 plasmid TC1, complete sequenceinvertase recombinase-like protein3e-0755.1
NC_009675:3067567:308033930803393080941603Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeresolvase domain-containing protein3e-0755.1
NC_007973:3240866:326311432631143263728615Ralstonia metallidurans CH34 chromosome 1, complete sequenceResolvase-like protein3e-0755.1
NC_002655:301940:306856306856307446591Escherichia coli O157:H7 EDL933, complete genomeDNA invertase from prophage CP-933H3e-0755.1
NC_011894:6888562:689656168965616897118558Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein5e-0754.7
NC_013235:3913000:392419139241913924832642Nakamurella multipartita DSM 44233, complete genomeResolvase domain protein5e-0754.7
NC_012490:3094857:309723030972303097820591Rhodococcus erythropolis PR4, complete genomesite-specific recombinase5e-0754.7
NC_017201:139000:139130139130139702573Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,putative site-specific recombinase5e-0754.7
NC_014541:1231021:123993312399331240499567Ferrimonas balearica DSM 9799 chromosome, complete genomeResolvase domain protein5e-0754.7
NC_011891:17940:225982259823185588Anaeromyxobacter dehalogenans 2CP-1, complete genomeResolvase domain protein4e-0754.7
NC_015942:763500:775184775184775762579Acidithiobacillus ferrivorans SS3 chromosome, complete genomeResolvase domain-containing protein4e-0754.7
NC_020911:3475096:348581034858103486475666Octadecabacter antarcticus 307, complete genomeresolvase7e-0754.3
NC_013172:2877722:289038928903892890976588Brachybacterium faecium DSM 4810, complete genomesite-specific recombinase, DNA invertase Pin7e-0754.3
NC_009092:1127000:114712611471261147743618Shewanella loihica PV-4, complete genomeResolvase, N-terminal domain6e-0754.3
NC_011777:161505:165657165657166208552Bacillus cereus AH820 plasmid pAH820_272, complete sequenceresolvase6e-0754.3
NC_016812:3641786:364349636434963644047552Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR5e-0754.3
NC_008380:4968492:497249549724954973052558Rhizobium leguminosarum bv. viciae 3841, complete genomeputative DNA-invertase from lambdoid prophage E149e-0753.9
NC_017387:247462:263055263055263429375Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein9e-0753.9
NC_017387:247462:273727273727274101375Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein9e-0753.9
NC_010170:1470755:148722514872251487650426Bordetella petrii, complete genomeputative resolvase9e-0753.9
NC_007761:2071500:208028020802802080837558Rhizobium etli CFN 42, complete genomeprobable resolvase protein8e-0753.9
NC_012125:2826624:285008028500802850628549Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-invertase Hin8e-0753.9
NC_020063:2531643:254405725440572544623567Enterobacteriaceae bacterium strain FGI 57, complete genomesite-specific recombinase, DNA invertase Pin7e-0753.9
NC_015164:3659000:366435036643503664994645Bacteroides salanitronis DSM 18170 chromosome, complete genomeResolvase domain7e-0753.9
NC_008607:11663:334833348334091609Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceResolvase, N-terminal domain1e-0653.5
NC_015666:252740:271627271627272355729Halopiger xanaduensis SH-6 chromosome, complete genomeResolvase domain-containing protein1e-0653.5
NC_006511:2718401:273066527306652731159495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-0653.5
NC_011147:2713937:272620127262012726695495Salmonella enterica subsp. enterica serovar Paratyphi A str1e-0653.5
NC_016783:1397975:140567414056741406147474Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative resolvase1e-0653.5
NC_010995:1417329:143561314356131436203591Cellvibrio japonicus Ueda107, complete genomeinvertase/recombinase like protein1e-0653.5
NC_012918:1174412:118527311852731185842570Geobacter sp. M21 chromosome, complete genomeresolvase9e-0753.5
NC_012988:769981:782110782110782730621Methylobacterium extorquens DM4, complete genomeresolvase2e-0653.1
NC_012988:769981:793382793382794002621Methylobacterium extorquens DM4, complete genomeresolvase2e-0653.1
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein1e-0653.1
NC_012808:157156:168036168036168599564Methylobacterium extorquens AM1, complete genomeputative resolvase1e-0653.1
NC_013457:1703201:171521517152151715829615Vibrio sp. Ex25 chromosome 2, complete genomeresolvase1e-0653.1
NC_010815:40357:550125501255566555Geobacter lovleyi SZ plasmid pGLOV01, complete sequence1e-0653.1
NC_007712:1182518:119172311917231192313591Sodalis glossinidius str. 'morsitans', complete genomephage DNA-invertase1e-0653.1
NC_009485:5171658:518306951830695183713645Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-invertase1e-0653.1
NC_003902:1858349:190068919006891901255567Xanthomonas campestris pv. campestris str. ATCC 33913, completeinvertase/recombinase protein1e-0653.1
NC_007086:3118116:313857331385733139139567Xanthomonas campestris pv. campestris str. 8004, complete genomeinvertase/recombinase protein1e-0653.1
NC_010338:1394550:140808814080881408630543Caulobacter sp. K31, complete genomeResolvase domain1e-0653.1
NC_007507:101887:112277112277112843567Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Site-specific recombinase2e-0652.8
NC_012988:1777618:178874517887451789308564Methylobacterium extorquens DM4, complete genomeresolvase2e-0652.8
NC_013720:545829:558831558831559415585Pirellula staleyi DSM 6068, complete genomeResolvase domain protein2e-0652.8
NC_007626:3522265:359093035909303591538609Magnetospirillum magneticum AMB-1, complete genomeSite-specific recombinase2e-0652.8
NC_015147:9761:230472304723577531Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completesite-specific recombinase, DNA invertase Pin2e-0652.8
NC_011365:502620:511327511327511944618Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeResolvase domain2e-0652.4
NC_008044:1736000:175037117503711751012642Silicibacter sp. TM1040, complete genomeResolvase-like2e-0652.4
NC_011777:161505:176703176703177257555Bacillus cereus AH820 plasmid pAH820_272, complete sequenceDNA-invertase hin2e-0652.4
NC_009256:277020:297910297910298500591Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein2e-0652.4
NC_012808:1122341:113699211369921137555564Methylobacterium extorquens AM1, complete genomeputative resolvase2e-0652.4
NC_012796:4075583:412277141227714123121351Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-0652
NC_016782:56500:686386863869126489Corynebacterium diphtheriae 241 chromosome, complete genomeDNA-invertase3e-0652
NC_016786:54000:686376863769125489Corynebacterium diphtheriae HC01 chromosome, complete genomeDNA-invertase3e-0652
NC_010334:2131939:214181821418182142375558Shewanella halifaxensis HAW-EB4, complete genomeResolvase domain3e-0652
NC_009077:3851203:3859860385986038610021143Mycobacterium sp. JLS, complete genomeResolvase, N-terminal domain4e-0651.6
NC_016785:1357500:136148213614821361955474Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative resolvase4e-0651.6
NC_016786:1359064:138356413835641384037474Corynebacterium diphtheriae HC01 chromosome, complete genomeputative resolvase4e-0651.6
NC_016787:1350676:137667113766711377144474Corynebacterium diphtheriae HC03 chromosome, complete genomeputative resolvase4e-0651.6
NC_016788:1376000:138013513801351380608474Corynebacterium diphtheriae HC04 chromosome, complete genomeputative resolvase4e-0651.6
NC_016790:1345638:135273713527371353210474Corynebacterium diphtheriae VA01 chromosome, complete genomeputative resolvase4e-0651.6
NC_016800:1411000:141140214114021411875474Corynebacterium diphtheriae BH8 chromosome, complete genomeputative resolvase4e-0651.6
NC_016801:1422500:142658314265831427056474Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative resolvase4e-0651.6
NC_010125:2295500:230445923044592305064606Gluconacetobacter diazotrophicus PAl 5, complete genomeputative resolvase4e-0651.6
NC_010682:2642269:265589026558902656480591Ralstonia pickettii 12J chromosome 1, complete sequenceResolvase domain5e-0651.2
NC_017986:1862408:187575318757531876328576Pseudomonas putida ND6 chromosome, complete genomeputative DNA invertase5e-0651.2
NC_013521:3204250:324246732424673243060594Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase, DNA invertase Pin5e-0651.2
NC_011769:3434744:344837734483773449063687Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeResolvase domain protein5e-0651.2
NC_008255:32455:605256052561148624Cytophaga hutchinsonii ATCC 33406, complete genomepossible DNA-invertase from lambdoid prophage Qin5e-0651.2
NC_008526:343445:344092344092344661570Lactobacillus casei ATCC 334, complete genomeSite-specific recombinase, DNA invertase Pin related protein5e-0651.2
NC_008699:1132790:114850611485061149189684Nocardioides sp. JS614, complete genomeResolvase, N-terminal domain6e-0650.8
NC_007622:1397407:142034914203491420960612Staphylococcus aureus RF122, complete genomerecombinase6e-0650.8
NC_010172:5447189:545955954595595460122564Methylobacterium extorquens PA1, complete genomeResolvase domain7e-0650.8
NC_020181:5217000:524391752439175244486570Enterobacter aerogenes EA1509E, complete genomeDNA-invertase1e-0550.4
NC_010804:831000:836078836078836791714Burkholderia multivorans ATCC 17616 chromosome 1, completeserine recombinase1e-0550.4
NC_010084:2674972:268798226879822688695714Burkholderia multivorans ATCC 17616 chromosome 1, completeresolvase domain-containing protein1e-0550.4
NC_011283:2185462:219824121982412198864624Klebsiella pneumoniae 342 chromosome, complete genomeresolvase9e-0650.4
NC_015731:1578106:159112815911281591688561Nitrosomonas sp. Is79A3 chromosome, complete genomeResolvase domain-containing protein8e-0650.4
NC_010172:2722000:273599827359982736843846Methylobacterium extorquens PA1, complete genomeResolvase domain1e-0550.4