Pre_GI: BLASTP Hits

Some Help

Query: NC_012490:2660089:2665420 Rhodococcus erythropolis PR4, complete genome

Start: 2665420, End: 2666226, Length: 807

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013956:1762171:178360717836071784491885Pantoea ananatis LMG 20103 chromosome, complete genomeYeaM9e-29127
NC_014210:2747787:276307727630772763898822Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, AraC family2e-25116
NC_007348:1903937:192325319232531923978726Ralstonia eutropha JMP134 chromosome 2, complete sequenceHelix-turn-helix, AraC type3e-25115
NC_014666:5449884:547133154713315472074744Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, AraC family6e-25114
NC_009483:936000:937489937489938325837Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix domain-containing protein6e-24111
NC_014840:76232:754807548076235756Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, AraC family1e-23110
NC_015968:2110175:212686921268692127654786Enterobacter asburiae LF7a chromosome, complete genomeAraC family transcriptional regulator2e-23109
NC_008752:725189:755815755815756645831Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, AraC family1e-22107
NC_016582:3763476:376347637634763764261786Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcription regulator1e-22107
NC_009792:2688747:269857326985732699328756Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-22105
NC_012723:71637:914479144792229783Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTranscriptional Regulator, AraC family protein7e-22104
NC_018080:1100047:111602911160291116757729Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator2e-21103
NC_010943:2815865:283222528322252833019795Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional regulator3e-21102
NC_002516:4285477:428779442877944288606813Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-21102
NC_011770:1226923:124137212413721242184813Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator4e-21101
NC_008463:1223012:123718312371831237995813Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator4e-21101
NC_007492:6372900:640591764059176406774858Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family5e-21101
NC_007511:3080849:308140230814023082220819Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-21101
NC_014541:1753776:175619617561961756999804Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family7e-21101
NC_016628:1190366:120559712055971206388792Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator1e-20100
NC_011386:931140:942349942349943251903Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, AraC-family3e-2099.4
NC_018524:5066720:508661950866195087341723Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein2e-2099.4
NC_015684:3157941:318130731813073182107801Oligotropha carboxidovorans OM5 chromosome, complete genomeAraC family transcriptional regulator3e-2099
NC_008543:259450:277247277247278065819Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-2098.6
NC_013850:3303500:330401633040163304807792Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, AraC family5e-2098.2
NC_009648:1956070:196297019629701963770801Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein8e-2097.4
NC_008391:2253188:227088422708842271702819Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1997.1
NC_008228:2295841:230915323091532309944792Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AraC family1e-1997.1
NC_012731:2693091:269821426982142699014801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator1e-1997.1
NC_014118:987889:992476992476993264789Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family3e-1995.9
NC_010552:293703:319588319588320406819Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-1995.5
NC_009040:43791:590355903559835801Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completetranscriptional regulator, AraC family4e-1995.1
NC_014931:4234288:426418542641854264967783Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family5e-1995.1
NC_016027:2580477:259361925936192594443825Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator6e-1994.7
NC_011283:2627050:263595226359522636752801Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator6e-1994.7
NC_014540:1835493:184139518413951842174780Burkholderia sp. CCGE1003 chromosome 2, complete sequenceAraC family transcriptional regulator8e-1994.4
NC_009921:3551036:3574481357448135760221542Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family9e-1994
NC_013850:2624899:263287526328752633648774Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization2e-1893.2
NC_014310:2017927:204064720406472041450804Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator2e-1893.2
NC_011883:487187:506470506470507279810Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transcriptional regulator, AraC family4e-1892
NC_010694:63654:738347383474679846Erwinia tasmaniensis, complete genomeProbable transcriptional regulator4e-1892
NC_009656:4527457:455663845566384557474837Pseudomonas aeruginosa PA7 chromosome, complete genomeputative HTH-type transcriptional regulator YeaM5e-1891.7
NC_005296:5238882:525889052588905259636747Rhodopseudomonas palustris CGA009, complete genomeCUPIN domain:transcriptional regulator, AraC family6e-1891.3
NC_014121:2514544:253240025324002533191792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeAraC family transcriptional regulator7e-1891.3
NC_011004:5520771:554078055407805541526747Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AraC family9e-1890.9
NC_015663:3742738:375106637510663751380315Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative AraC-type regulatory protein1e-1790.5
NC_013850:2624899:262993326299332630700768Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization2e-1790.1
NC_014500:1862000:188072318807231881490768Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator1e-1790.1
NC_011283:2627050:263208426320842632851768Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator2e-1789.7
NC_010512:866932:867480867480868280801Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-1789.7
NC_020260:2725201:272979427297942730303510Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator4e-1789
NC_007802:3807500:381372638137263814487762Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family3e-1789
NC_012731:2693091:270144927014492702216768Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator3e-1789
NC_016845:2729654:274359227435922744359768Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein3e-1789
NC_009648:1956070:196782919678291968596768Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein4e-1788.6
NC_015637:325561:338615338615339502888Vibrio anguillarum 775 chromosome chromosome II, complete sequenceAraC family transcriptional regulator9e-1787.4
NC_014323:992978:102778110277811028596816Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein1e-1687
NC_008543:90312:919879198792808822Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1687
NC_016628:763833:767654767654768496843Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein2e-1686.7
NC_014839:12519:319763197632758783Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, AraC family1e-1686.7
NC_014973:4503054:450961545096154510385771Geobacter sp. M18 chromosome, complete genomeAraC family transcriptional regulator2e-1685.9
NC_008061:2153495:217696521769652177786822Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-1685.1
NC_012560:201237:213263213263214153891Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, AraC-family1e-1583.6
NC_021150:201237:213263213263214153891Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, AraC-family1e-1583.6
NC_020209:47504:523785237852890513Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator1e-1583.6
NC_007963:814148:840043840043840843801Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, AraC family1e-1480.9
NC_015663:1869000:188558618855861886341756Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator3e-1479
NC_014837:33014:419974199742845849Pantoea sp. At-9b chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein3e-1479
NC_016628:763833:780408780408780857450Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein4e-1479
NC_014966:1668822:167527516752751676093819Vibrio vulnificus MO6-24/O chromosome II, complete sequenceAraC family transcripitonal regulator7e-1477.8
NC_010170:1551923:156014815601481560621474Bordetella petrii, complete genomeputative transcriptional regulator9e-1477.4
NC_020126:3426439:343244534324453433212768Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator1e-1377
NC_018691:4619245:464288746428874643687801Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator4e-1375.5
NC_015859:3177199:3208944320894432104971554Corynebacterium variabile DSM 44702 chromosome, complete genomeAraC DNA-binding transcription regulator5e-1375.1
NC_010511:1691753:170494717049471705747801Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator5e-1375.1
NC_020209:47504:921739217392502330Pseudomonas poae RE*1-1-14, complete genomeDNA-binding domain-containing protein2e-1272.8
NC_016628:763833:765986765986766717732Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator3e-1272.4
NC_014550:301894:3114933114933128781386Arthrobacter arilaitensis Re117, complete genomeAraC family transcriptional regulator7e-1271.2
NC_011887:72364:951569515695977822Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, AraC family1e-1170.5
NC_009832:622969:642567642567643334768Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family2e-1169.7
NC_008700:3927896:393709039370903937857768Shewanella amazonensis SB2B, complete genomeAraC-type DNA-binding domain-containing protein1e-1067
NC_016845:2729654:273873327387332739047315Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein2e-1066.6
NC_015947:3991696:399428339942833995086804Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator2e-1066.2
NC_008686:1383891:143018614301861430767582Paracoccus denitrificans PD1222 chromosome 1, complete sequencehelix-turn-helix- domain containing protein, AraC type4e-1065.5
NC_009654:304000:309532309532310299768Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator4e-1065.1
NC_009921:6483660:649183664918366492549714Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family9e-1064.3
NC_011071:4000620:400570140057014006504804Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family1e-0963.9
NC_013421:1696746:170689217068921707548657Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, AraC family3e-0962.8
NC_010001:986500:9958119958119968781068Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family4e-0962
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family8e-0960.8
NC_014844:762794:781918781918782757840Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAraC type helix-turn-helix- domain-containing protein2e-0860.1
NC_016077:702000:723122723122724057936Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0859.7
NC_015277:2096266:210040521004052101220816Sphingobacterium sp. 21 chromosome, complete genometranscriptional regulator, AraC family3e-0859.3
NC_013406:3819577:384470238447023845550849Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator6e-0858.2
NC_014121:3188928:320787632078763208088213Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-0858.2
NC_009663:946285:951154951154952008855Sulfurovum sp. NBC37-1, complete genomeAraC family transcriptional regulator2e-0756.2
NC_007509:971500:987989987989988825837Burkholderia sp. 383 chromosome 3, complete sequencetwo component transcriptional regulator, AraC family3e-0755.8
NC_014718:791528:795900795900796277378Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTranscriptional regulator, AraC family1e-0653.9
NC_002505:168532:197873197873198685813Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family1e-0653.9
NC_016944:168530:197883197883198695813Vibrio cholerae IEC224 chromosome I, complete sequenceAraC/XylS family transcriptional regulator1e-0653.9
NC_016445:2593800:262314126231412623944804Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeAraC/XylS family transcriptional regulator1e-0653.9
NC_015410:2505168:251160125116012512404804Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_008314:2744553:2764060276406027651871128Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator6e-0651.6
NC_002928:3715492:3726212372621237272161005Bordetella parapertussis 12822, complete genomeTranscriptional regulator8e-0651.2
NC_002927:4130697:414150941415094142483975Bordetella bronchiseptica RB50, complete genomeTranscriptional regulator1e-0550.8
NC_017223:2618535:262834226283422629316975Bordetella pertussis CS chromosome, complete genometranscriptional regulator1e-0550.8
NC_002929:2589202:260370626037062604680975Bordetella pertussis Tohama I, complete genomeTranscriptional regulator1e-0550.8