Pre_GI: BLASTP Hits

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Query: NC_012490:2660089:2663084 Rhodococcus erythropolis PR4, complete genome

Start: 2663084, End: 2663854, Length: 771

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016802:2035723:2055123205512320562831161Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein2e-62239
NC_016788:2054739:2072827207282720739871161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-62238
NC_016788:2007721:2025809202580920269691161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-62238
NC_007912:335500:3375273375273387231197Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family1e-48192
NC_007492:2203220:2221079222107922223081230Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-46186
NC_014618:690056:6919586919586931841227Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein9e-45180
NC_012962:484899:4848994848994861251227Photorhabdus asymbiotica, complete genomehypothetical protein1e-44179
NC_020418:116500:1520921520921533181227Morganella morganii subsp. morganii KT, complete genomeProtein RtcB2e-43176
NC_011662:2402408:2405883240588324070791197Thauera sp. MZ1T, complete genomeprotein of unknown function UPF00275e-43174
NC_011884:315839:3355893355893367701182Cyanothece sp. PCC 7425, complete genomeprotein of unknown function UPF00273e-42171
NC_007333:1559321:1574764157476415759511188Thermobifida fusca YX, complete genomehypothetical protein7e-40164
NC_009142:3943829:3959521395952139607111191Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein8e-36150
NC_018605:558391:5725855725855737331149Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeRNA-splicing ligase RtcB2e-22106
NC_017161:927290:9305039305039319451443Hydrogenobacter thermophilus TK-6 chromosome, complete genomehypothetical protein1e-1997.1
NC_013799:927300:9305139305139319551443Hydrogenobacter thermophilus TK-6, complete genomehypothetical protein1e-1997.1
NC_017243:2813733:2816188281618828173661179Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein2e-1996.7
NC_015185:1114180:1128671112867111298491179Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hypothetical protein2e-1996.7
NC_014721:434501:4412494412494426041356Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein1e-1996.7
NC_013156:573037:5812785812785827201443Methanocaldococcus fervens AG86, complete genomeprotein of unknown function UPF00271e-1893.6
NC_013926:920279:9280259280259294791455Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function UPF00272e-1789.7
NC_011766:1106739:1131237113123711326851449Desulfurococcus kamchatkensis 1221n chromosome, complete genomeprotein of unknown function UPF00272e-1789.4
NC_014828:1335154:1373891137389113751111221Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function UPF00274e-1788.2
NC_008698:235688:2374232374232388711449Thermofilum pendens Hrk 5, complete genomeprotein of unknown function UPF00277e-1787.8
NC_017275:1189162:1212729121272912141771449Sulfolobus islandicus HVE10/4 chromosome, complete genomearchaeal RNA splicing ligase9e-1787.4
NC_002754:824180:8241808241808256281449Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1687
NC_014160:748743:7589827589827604301449Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein2e-1685.9
NC_016609:8251438:8265852826585282673151464Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein3e-1685.5
NC_015320:828972:8438148438148452561443Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein4e-1685.1
NC_019791:638500:6530926530926545341443Caldisphaera lagunensis DSM 15908 chromosome, complete genomehypothetical protein7e-1684.3
NC_007181:1094422:1121472112147211229201449Sulfolobus acidocaldarius DSM 639, complete genomeuniversally conserved protein1e-1584
NC_016510:1749967:1758174175817417595651392Flavobacterium columnare ATCC 49512 chromosome, complete genomehypothetical protein1e-1584
NC_013642:1425795:1440425144042514418491425Thermotoga naphthophila RKU-10, complete genomeprotein of unknown function UPF00279e-1684
NC_015437:2354429:2369932236993223711731242Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function UPF00271e-1583.6
NC_010483:1467616:1480614148061414820381425Thermotoga sp. RQ2, complete genomeprotein of unknown function UPF00271e-1583.6
NC_009486:1403175:1416173141617314175971425Thermotoga petrophila RKU-1 chromosome, complete genomehypothetical protein2e-1583.2
NC_005213:63752:7215872158735911434Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-1582.4
NC_007775:2546833:2556041255604125574711431Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein1e-1480.5
NC_009718:731670:7437447437447451621419Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein3e-1479
NC_013790:583474:6063026063026077501449Methanobrevibacter ruminantium M1 chromosome, complete genomehypothetical protein9e-1477.4
NC_013940:137713:1476071476071490551449Deferribacter desulfuricans SSM1 megaplasmid pDF308, completehypothetical protein6e-1374.7
NC_013158:1085937:1107305110730511087531449Halorhabdus utahensis DSM 12940, complete genomeprotein of unknown function UPF00271e-1273.6
NC_020054:4161049:4195038419503841965761539Fibrella aestuarina BUZ 2 drat genomeprotein of unknown function UPF00272e-1273.2
NC_000909:597692:6079836079836108892907Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-0962.4
NC_005835:1345790:1348331134833113497611431Thermus thermophilus HB27, complete genomertcB protein6e-0961.2
NC_013887:1462918:1468541146854114714502910Methanocaldococcus sp. FS406-22 chromosome, complete genomeprotein of unknown function UPF00271e-0860.1
NC_019902:1863162:1877988187798818794181431Thioalkalivibrio nitratireducens DSM 14787, complete genomeProtein RtcB3e-0755.8
NC_003551:1678882:1683574168357416865402967Methanopyrus kandleri AV19, complete genomeUncharacterized conserved protein, contains an intein1e-0653.5