Pre_GI: BLASTP Hits

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Query: NC_012490:2660089:2660089 Rhodococcus erythropolis PR4, complete genome

Start: 2660089, End: 2660613, Length: 525

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016788:2054739:2072827207282720739871161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-59226
NC_016788:2007721:2025809202580920269691161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-59226
NC_016802:2035723:2055123205512320562831161Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein6e-59226
NC_011662:2402408:2405883240588324070791197Thauera sp. MZ1T, complete genomeprotein of unknown function UPF00275e-43173
NC_011884:315839:3355893355893367701182Cyanothece sp. PCC 7425, complete genomeprotein of unknown function UPF00272e-42171
NC_007912:335500:3375273375273387231197Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family3e-42171
NC_020418:116500:1520921520921533181227Morganella morganii subsp. morganii KT, complete genomeProtein RtcB1e-41169
NC_007492:2203220:2221079222107922223081230Pseudomonas fluorescens PfO-1, complete genomehypothetical protein4e-41167
NC_014618:690056:6919586919586931841227Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein9e-41166
NC_012962:484899:4848994848994861251227Photorhabdus asymbiotica, complete genomehypothetical protein2e-40164
NC_009142:3943829:3959521395952139607111191Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-34145
NC_007333:1559321:1574764157476415759511188Thermobifida fusca YX, complete genomehypothetical protein1e-33142
NC_016510:1749967:1758174175817417595651392Flavobacterium columnare ATCC 49512 chromosome, complete genomehypothetical protein1e-1995.9
NC_020054:4161049:4195038419503841965761539Fibrella aestuarina BUZ 2 drat genomeprotein of unknown function UPF00272e-1994.7
NC_018605:558391:5725855725855737331149Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeRNA-splicing ligase RtcB5e-1994
NC_015437:2354429:2369932236993223711731242Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function UPF00273e-1684.7
NC_016609:8251438:8265852826585282673151464Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein1e-1582.8
NC_013921:755800:7754147754147769221509Thermoanaerobacter italicus Ab9 chromosome, complete genomeprotein of unknown function UPF00272e-1582
NC_014209:787535:8030118030118045191509Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function UPF00272e-1582
NC_013158:1085937:1107305110730511087531449Halorhabdus utahensis DSM 12940, complete genomeprotein of unknown function UPF00274e-1580.9
NC_010321:1616362:1621434162143416227981365Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein4e-1580.9
NC_014964:1608575:1613647161364716150111365Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein4e-1580.9
NC_014721:434501:4412494412494426041356Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein7e-1580.1
NC_013790:583474:6063026063026077501449Methanobrevibacter ruminantium M1 chromosome, complete genomehypothetical protein8e-1579.7
NC_009718:731670:7437447437447451621419Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein4e-1477.4
NC_016048:456732:472363472363473229867Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1375.9
NC_007775:2546833:2556041255604125574711431Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein5e-1373.9
NC_019791:638500:6530926530926545341443Caldisphaera lagunensis DSM 15908 chromosome, complete genomehypothetical protein1e-1272.8
NC_014160:748743:7589827589827604301449Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein1e-1272.4
NC_008698:235688:2374232374232388711449Thermofilum pendens Hrk 5, complete genomeprotein of unknown function UPF00273e-1271.2
NC_017243:2813733:2816188281618828173661179Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein3e-1271.2
NC_019902:1863162:1877988187798818794181431Thioalkalivibrio nitratireducens DSM 14787, complete genomeProtein RtcB3e-1271.2
NC_008095:1428665:1451139145113914522961158Myxococcus xanthus DK 1622, complete genomehypothetical protein5e-1270.5
NC_014828:1335154:1373891137389113751111221Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function UPF00277e-1270.1
NC_013926:920279:9280259280259294791455Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function UPF00271e-1169.7
NC_010483:1467616:1480614148061414820381425Thermotoga sp. RQ2, complete genomeprotein of unknown function UPF00271e-1169.3
NC_013642:1425795:1440425144042514418491425Thermotoga naphthophila RKU-10, complete genomeprotein of unknown function UPF00271e-1169.3
NC_009486:1403175:1416173141617314175971425Thermotoga petrophila RKU-1 chromosome, complete genomehypothetical protein1e-1169.3
NC_005213:63752:7215872158735911434Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1169.3
NC_011766:1106739:1131237113123711326851449Desulfurococcus kamchatkensis 1221n chromosome, complete genomeprotein of unknown function UPF00273e-1168.2
NC_005835:1345790:1348331134833113497611431Thermus thermophilus HB27, complete genomertcB protein2e-1065.5
NC_014623:2475598:2490273249027324916971425Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein2e-1065.1
NC_015320:828972:8438148438148452561443Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein2e-1065.1
NC_013517:825100:8430138430138440861074Sebaldella termitidis ATCC 33386, complete genomerelease factor H-coupled RctB family protein3e-1064.7
NC_015185:1114180:1128671112867111298491179Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hypothetical protein1e-0962.8
NC_002754:824180:8241808241808256281449Sulfolobus solfataricus P2, complete genomehypothetical protein2e-0962
NC_017275:1189162:1212729121272912141771449Sulfolobus islandicus HVE10/4 chromosome, complete genomearchaeal RNA splicing ligase2e-0961.6
NC_013940:137713:1476071476071490551449Deferribacter desulfuricans SSM1 megaplasmid pDF308, completehypothetical protein4e-0960.8
NC_013156:573037:5812785812785827201443Methanocaldococcus fervens AG86, complete genomeprotein of unknown function UPF00274e-0960.8
NC_015275:654959:6679246679246690301107Clostridium lentocellum DSM 5427 chromosome, complete genomerelease factor H-coupled RctB family protein5e-0960.5
NC_013799:927300:9305139305139319551443Hydrogenobacter thermophilus TK-6, complete genomehypothetical protein5e-0960.5
NC_017161:927290:9305039305039319451443Hydrogenobacter thermophilus TK-6 chromosome, complete genomehypothetical protein5e-0960.5
NC_007181:1094422:1121472112147211229201449Sulfolobus acidocaldarius DSM 639, complete genomeuniversally conserved protein1e-0859.3
NC_013887:1462918:1468541146854114714502910Methanocaldococcus sp. FS406-22 chromosome, complete genomeprotein of unknown function UPF00272e-0858.5
NC_005085:1498000:1503319150331915047521434Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-0858.5
NC_000909:597692:6079836079836108892907Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-0857.8
NC_003551:1678882:1683574168357416865402967Methanopyrus kandleri AV19, complete genomeUncharacterized conserved protein, contains an intein3e-0857.8
NC_013741:687546:6893446893446922292886Archaeoglobus profundus DSM 5631, complete genomeprotein of unknown function UPF00272e-0755.1