Pre_GI: BLASTN Hits

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Query: NC_012488:453431 Listeria monocytogenes Clip81459, complete genome

Start: 453431, End: 472885, Length: 19455

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: During an outbreak of listeriosis aming patients with AIDS in California, USA in 1985. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002973:46171246171248370521994Listeria monocytogenes str. 4b F2365, complete genome014800BLASTN svgBLASTP svg
NC_003212:45621445621447968423471Listeria innocua Clip11262, complete genome08364BLASTN svgBLASTP svg
NC_008555:40035240035242159921248Listeria welshimeri serovar 6b str. SLCC5334, complete genome07184BLASTN svgBLASTP svg
NC_016011:38200038200040188119882Listeria ivanovii subsp. ivanovii PAM 55, complete genome1e-23119BLASTN svgBLASTP svg
NC_002973:36965036965038847418825Listeria monocytogenes str. 4b F2365, complete genome2e-0971.9BLASTN svgBLASTP svg