Pre_GI: BLASTP Hits

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Query: NC_012483:729000:752677 Acidobacterium capsulatum ATCC 51196, complete genome

Start: 752677, End: 753114, Length: 438

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:3672768:3676616367661636793962781Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein6e-46182
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein3e-45180
NC_012483:3731542:3754841375484137575942754Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein1e-43174
NC_004851:191709:198803198803199195393Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein4e-1786.7
NC_017319:192482:198752198752199123372Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein5e-1786.3
NC_007385:157516:1693421693421736254284Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment1e-1685.1
NC_007607:87000:960909609096509420Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment2e-1684.3
NC_007608:97092:102927102927103346420Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment3e-1684
NC_016846:24500:4675446754520125259Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer nickase/helicase TraI1e-1581.6
NC_009378:106193:1061931061931114335241Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugal transfer nickase/helicase TraI1e-1478.6
NC_009484:2660048:2674385267438526771562772Acidiphilium cryptum JF-5 chromosome, complete genomeexonuclease V subunit alpha1e-1478.6
NC_010571:2423732:2437973243797324407052733Opitutus terrae PB90-1, complete genomeconjugative relaxase domain protein2e-1270.9
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system6e-1269.3
NC_004460:708416:7159707159707217565787Vibrio vulnificus CMCP6 chromosome II, complete sequenceATP-dependent exoDNAse, alpha subunit1e-1168.9
NC_011891:1225000:1242880124288012456602781Anaeromyxobacter dehalogenans 2CP-1, complete genomeconjugative relaxase domain protein2e-1167.8
NC_013422:991500:1012572101257210154032832Halothiobacillus neapolitanus c2, complete genomeconjugative relaxase domain protein6e-1166.2
NC_009998:62000:6726667266732265961Shewanella baltica OS195 plasmid pS19501, complete sequenceconjugative transfer relaxase protein TraI2e-1064.3
NC_014819:25765:4311743117462603144Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeconjugative relaxase domain protein4e-1063.5
NC_010606:25090:2872928729308792151Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein4e-1063.5
NC_008322:1186000:1188914118891411920213108Shewanella sp. MR-7, complete genomeTrwC protein7e-1062.8
NC_020453:3950838:3987555398755539886791125Agromonas oligotrophica S58 DNA, complete genomeputative ATP-dependent exoDNAse (exonuclease V) subunit alpha8e-1062.4
NC_007722:851129:8691878691878720992913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein1e-0962
NC_007794:2304768:2324303232430323259311629Novosphingobium aromaticivorans DSM 12444, complete genomeTrwC protein2e-0961.6
NC_015458:327009:3562813562813591782898Pusillimonas sp. T7-7 chromosome, complete genomeTrwC2e-0961.2
NC_007722:168937:1893461893461922582913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein3e-0960.5
NC_011916:467106:4887684887684915782811Caulobacter crescentus NA1000 chromosome, complete genomeDNA relaxase/conjugal transfer nickase-helicase TrwC2e-0857.8
NC_009007:57804:7601176011793463336Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraI2e-0857.8
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein1e-0755.5
NC_013730:2359939:2384855238485523876142760Spirosoma linguale DSM 74, complete genomeconjugative relaxase domain protein1e-0755.5
NC_016609:4233701:4273299427329942760132715Niastella koreensis GR20-10 chromosome, complete genomeconjugative relaxase domain-containing protein1e-0755.1