Pre_GI: BLASTN Hits

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Query: NC_012466:590883 Streptococcus pneumoniae JJA, complete genome

Start: 590883, End: 610682, Length: 19800

Host Lineage: Streptococcus pneumoniae; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a member of the normal human nasopharyngeal flora. There are more than 85 different antigenic types of S. pneumoniae, which are classified based on their capsule antigens. This organism is also the most common cause of sinusitis, acute bacterial otitis media, and conjunctivitis beyond early childhood. S. pneumoniae is also known to cause pneumonia, meningitis, and bacteremia. Streptococci are Gram-positive, non-motile, non-spore forming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010582:620400*62040063897018571Streptococcus pneumoniae CGSP14, complete genome011090BLASTN svgBLASTP svg
NC_008533:592000*59200061436722368Streptococcus pneumoniae D39, complete genome06974BLASTN svgBLASTP svg
NC_003098:586941*58694160511618176Streptococcus pneumoniae R6, complete genome06974BLASTN svgBLASTP svg
NC_015875:646000*64600066924423245Streptococcus pseudopneumoniae IS7493 chromosome, complete genome05148BLASTN svgBLASTP svg
NC_010582:17715911771591179612624536Streptococcus pneumoniae CGSP14, complete genome6e-50206BLASTN svgBLASTP svg
NC_015875:1505034*1505034152997824945Streptococcus pseudopneumoniae IS7493 chromosome, complete genome6e-44186BLASTN svgBLASTP svg
NC_015875:190041*19004121116121121Streptococcus pseudopneumoniae IS7493 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_015875:1926981*1926981194941322433Streptococcus pseudopneumoniae IS7493 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_010380:12465512465515098226328Streptococcus pneumoniae Hungary19A-6, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_004606:62385362385365560031748Streptococcus pyogenes SSI-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012466:1367099*1367099138959922501Streptococcus pneumoniae JJA, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013171:636293*63629365943323141Anaerococcus prevotii DSM 20548, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012467:1997484*1997484202019322710Streptococcus pneumoniae P1031, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012466:20080002008000203011722118Streptococcus pneumoniae JJA, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010582:2091138*2091138211537024233Streptococcus pneumoniae CGSP14, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008533:19355001935500195411918620Streptococcus pneumoniae D39, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_003098:19257831925783194809922317Streptococcus pneumoniae R6, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012469:1403412*1403412142484321432Streptococcus pneumoniae Taiwan19F-14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008533:1380406*1380406140546125056Streptococcus pneumoniae D39, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003098:1372875*1372875139793025056Streptococcus pneumoniae R6, complete genome2e-0661.9BLASTN svgBLASTP svg