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Query: NC_012466:2008000:2029989 Streptococcus pneumoniae JJA, complete genome

Start: 2029989, End: 2030117, Length: 129

Host Lineage: Streptococcus pneumoniae; Streptococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a member of the normal human nasopharyngeal flora. There are more than 85 different antigenic types of S. pneumoniae, which are classified based on their capsule antigens. This organism is also the most common cause of sinusitis, acute bacterial otitis media, and conjunctivitis beyond early childhood. S. pneumoniae is also known to cause pneumonia, meningitis, and bacteremia. Streptococci are Gram-positive, non-motile, non-spore forming, catalase-negative cocci that occur in pairs or chains. Members of this genus vary widely in pathogenic potential. Most streptococci are facultative anaerobes, and some are obligate anaerobes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006448:5046:159861598616246261Streptococcus thermophilus LMG 18311, complete genomeIS861, transposase (orf1), IS3 family, truncated7e-1165.9
NC_006449:5046:160631606316347285Streptococcus thermophilus CNRZ1066, complete genomeIS861, transposase (orf1), IS3 family, truncated3e-0960.5
NC_021175:2037219:204494320449432045563621Streptococcus oligofermentans AS 1.3089, complete genomeIS3-Spn1, transposase3e-0753.9
NC_021175:2063611:207296120729612073158198Streptococcus oligofermentans AS 1.3089, complete genomeORFA, transposon ISSsa22e-0650.8