Pre_GI: BLASTP Hits

Some Help

Query: NC_012440:659646:677627 Persephonella marina EX-H1, complete genome

Start: 677627, End: 678256, Length: 630

Host Lineage: Persephonella marina; Persephonella; Hydrogenothermaceae; Aquificales; Aquificae; Bacteria

General Information: This species is a chemolithotrophic, thermophilic hydrogen-oxidizing bacterium. This strain was collected from a deep sea hydrothermal vent on the East Pacific Rise.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015557:905145:906509906509907246738Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-29127
NC_015587:905255:906619906619907356738Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-29127
NC_020411:905335:906699906699907436738Hydrogenobaculum sp. HO, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG5e-29127
NC_011126:922182:921448921448922185738Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-28125
NC_018604:1329228:133817613381761338988813Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor6e-24110
NC_014330:2409559:242009924200992420911813Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor6e-24110
NC_019908:852230:859282859282860094813Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor WhiG6e-24110
NC_018607:1134900:114385311438531144665813Brachyspira pilosicoli B2904 chromosome, complete genomeRNA polymerase sigma factor6e-24110
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-24110
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase4e-23107
NC_016514:2950860:295907129590712959790720Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon1e-22106
NC_016848:775822:777926777926778714789Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG1e-22106
NC_016843:775371:777659777659778447789Treponema pallidum subsp. pertenue str. Gauthier chromosome,DNA-directed RNA polymerase sigma subunit WhiG1e-22106
NC_016842:775368:777472777472778260789Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG1e-22106
NC_015714:768500:770767770767771555789Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed RNA polymerase sigma subunit WhiG1e-22106
NC_012438:159927:161195161195161917723Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA polymerase sigma-D factor (Sigma-28)3e-22105
NC_016844:775334:777826777826778614789Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG2e-22105
NC_017268:775000:777138777138777926789Treponema pallidum subsp. pallidum str. Chicago chromosome,RNA polymerase sigma factor WhiG2e-22105
NC_021508:775264:777368777368778156789Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed RNA polymerase sigma subunit WhiG2e-22105
NC_007759:1356439:136476413647641365549786Syntrophus aciditrophicus SB, complete genomeRNA polymerase flagellar sigma factor2e-22105
NC_003888:6103534:612104361210436121885843Streptomyces coelicolor A3(2), complete genomesigma factor WhiG2e-22105
NC_014150:233194:241288241288242106819Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-22104
NC_017243:1499757:151441615144161515243828Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG4e-22104
NC_000919:773784:775888775888776676789Treponema pallidum subsp. pallidum str. Nichols, complete genomesigma factor WhiG4e-22104
NC_010741:775000:777336777336778124789Treponema pallidum subsp. pallidum SS14, complete genomeRNA polymerase sigma-28 factor4e-22104
NC_012779:2281700:229874322987432299465723Edwardsiella ictaluri 93-146, complete genomeRNA polymerase sigma factor for flagellar operon4e-22104
NC_013956:2523955:252451025245102525232723Pantoea ananatis LMG 20103 chromosome, complete genomeFliA1e-21103
NC_016816:1912366:194426019442601944982723Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor for flagellar operon1e-21103
NC_015224:2017781:203906520390652039787723Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis sigma factor9e-22103
NC_008800:2695977:271399427139942714716723Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis sigma factor9e-22103
NC_012225:377441:389172389172389999828Brachyspira hyodysenteriae WA1, complete genomeRNA polymerase sigma factor WhiG8e-22103
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA7e-22103
NC_003902:2211790:222997722299772230744768Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor6e-22103
NC_010688:2532929:255433425543342555101768Xanthomonas campestris pv. campestris, complete genomeRNA polymerase sigma factor rpoD (Sigma-70).6e-22103
NC_010572:2216309:221630922163092217145837Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase sigma factor WhiG3e-21102
NC_003919:2233000:225816622581662258933768Xanthomonas axonopodis pv. citri str. 306, complete genomeRNA polymerase sigma factor2e-21102
NC_007508:2234080:225143322514332252200768Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor for flagellar operon FliA2e-21102
NC_017267:2326443:234651123465112347278768Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeRNA polymerase sigma factor2e-21102
NC_015222:1127675:112857711285771129293717Nitrosomonas sp. AL212 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-21102
NC_014377:1089894:109924110992411099978738Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-21102
NC_021177:6127431:614515861451586145994837Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor WhiG3e-21101
NC_017095:166896:191492191492192247756Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG7e-21100
NC_009654:3849774:387059938705993871336738Marinomonas sp. MWYL1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-21100
NC_012880:1765920:184124818412481841970723Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-2099
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon2e-2098.6
NC_004547:1970686:198611819861181986840723Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar biosynthesis sigma factor FliA3e-2098.2
NC_010730:1724443:172492517249251725653729Sulfurihydrogenibium sp. YO3AOP1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-2097.4
NC_014500:3023762:303527230352723035994723Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-28 (sigma F) factor5e-2097.4
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA5e-2097.4
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family1e-1996.7
NC_013592:1730505:174909117490911749813723Dickeya dadantii Ech586, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1996.7
NC_012917:2921932:292819629281962928918723Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1995.9
NC_012912:1788308:181042918104291811151723Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1995.5
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 42e-1995.5
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA12e-1892.4
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family3e-1892
NC_015391:2059191:207239420723942073110717Carnobacterium sp. 17-4 chromosome, complete genomeRNA polymerase sigma factor SigD6e-1890.5
NC_009828:600349:632038632038632748711Thermotoga lettingae TMO, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-1890.5
NC_008346:983816:996574996574997356783Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative RNA polymerase sigma factor9e-1890.1
NC_019940:293476:307389307389308144756Thioflavicoccus mobilis 8321 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor2e-1789.4
NC_020911:2921925:295782329578232958542720Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma factor for flagellar operon3e-1788.6
NC_011653:1728000:174502817450281745708681Thermosipho africanus TCF52B, complete genomeRNA polymerase sigma factor for flagellar operon3e-1788.2
NC_002947:4931476:493147649314764932216741Pseudomonas putida KT2440, complete genomeflagellar biosynthesis sigma factor FliA9e-1787
NC_017986:4374979:439493843949384395678741Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis sigma factor9e-1787
NC_014910:4026613:404772340477234048439717Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, flia/whig family8e-1787
NC_015422:4395388:441599244159924416708717Alicycliphilus denitrificans K601 chromosome, complete genomeRNA polymerase sigma 28 subunit FliA/WhiG8e-1787
NC_009512:1691930:171188917118891712629741Pseudomonas putida F1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG9e-1787
NC_009664:570768:581858581858582718861Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-1686.3
NC_010501:4080937:408141640814164082156741Pseudomonas putida W619, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1685.5
NC_015707:705628:706734706734707471738Thermotoga thermarum DSM 5069 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG3e-1685.1
NC_006177:3192500:320519732051973205958762Symbiobacterium thermophilum IAM 14863, complete genomeRNA polymerase sigma factor related to flagellar biosynthesis1e-1582.8
NC_007492:1735595:175314617531461753886741Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis sigma factor FliA2e-1582
NC_004129:1848701:187106618710661871806741Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis sigma factor FliA3e-1582
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon3e-1582
NC_009348:381752:391444391444392151708Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafS6e-1580.9
NC_008599:1489868:149019014901901490894705Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar biosynthesis sigma factor FliA1e-1376.6
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD2e-1375.9
NC_013093:2599591:261118526111852612069885Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily4e-1374.7
NC_013940:110340:117614117614118381768Deferribacter desulfuricans SSM1 megaplasmid pDF308, completeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-1272.4
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-1272.4
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor2e-1272.4
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor9e-1270.1
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family9e-1270.1
NC_015312:3675148:372328137232813724171891Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSigB/F/G subfamily RNA polymerase sigma-28 subunit4e-1168.2
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS5e-1167.8
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family5e-1167.8
NC_016048:2734563:275766727576672758377711Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase sigma factor6e-1167.4
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome8e-1167
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome1e-1066.6
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)1e-1066.6
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS1e-1066.6
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS1e-1066.6
NC_018704:347948:352252352252353040789Amphibacillus xylanus NBRC 15112, complete genomeRNA polymerase sigma-B factor2e-1066.2
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1066.2
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-1066.2
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-1065.9
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1065.9
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein2e-1065.5
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1065.5
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor3e-1065.5
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor3e-1065.1
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC3e-1065.1
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor3e-1065.1
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1065.1
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD4e-1064.7
NC_009664:452195:464798464798465481684Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family4e-1064.7
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family6e-1064.3
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-706e-1063.9
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD7e-1063.9
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family8e-1063.9
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily8e-1063.9
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD8e-1063.5
NC_006582:883922:886206886206886991786Bacillus clausii KSM-K16, complete genomesigma factor B1e-0963.2
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-0963.2
NC_017297:2531750:256721125672112567762552Clostridium botulinum F str. 230613 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0963.2
NC_009699:2552195:256707225670722567623552Clostridium botulinum F str. Langeland chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0963.2
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit2e-0962.8
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit2e-0962.8
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein2e-0962.4
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0962.4
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0962.4
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD2e-0962.4
NC_007947:2447635:2479188247918824811221935Methylobacillus flagellatus KT, complete genomesigma 70 (RpoD)2e-0962.4
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0962.4
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0962
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD3e-0962
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-0962
NC_012563:2680246:269292326929232693474552Clostridium botulinum A2 str. Kyoto, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0962
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit3e-0962
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg3e-0962
NC_005125:2811986:283022128302212830985765Gloeobacter violaceus PCC 7421, complete genomesigma factor SigF3e-0962
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD4e-0961.6
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)4e-0961.6
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)3e-0961.6
NC_021177:4221309:422711342271134228033921Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor3e-0961.6
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein3e-0961.6
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor3e-0961.6
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD5e-0961.2
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor5e-0961.2
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD4e-0961.2
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor4e-0961.2
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD7e-0960.8
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor6e-0960.8
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor6e-0960.8
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor6e-0960.8
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor6e-0960.8
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD6e-0960.8
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor6e-0960.8
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD6e-0960.8
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD6e-0960.8
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG5e-0960.8
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD5e-0960.8
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD5e-0960.8
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily9e-0960.5
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD9e-0960.5
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor8e-0960.5
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor8e-0960.5
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD7e-0960.5
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD7e-0960.5
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD7e-0960.5
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-0860.1
NC_000911:1284552:1301671130167113027801110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor1e-0860.1
NC_017039:1283732:1300698130069813018071110Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeRNA polymerase sigma factor1e-0860.1
NC_017052:1283720:1300686130068613017951110Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeRNA polymerase sigma factor1e-0860.1
NC_017277:1283477:1300488130048813015971110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor1e-0860.1
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD1e-0860.1
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD1e-0860.1
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0860.1
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily9e-0960.1
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod9e-0960.1
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD9e-0960.1
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor1e-0859.7
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor1e-0859.7
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor1e-0859.7
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-0859.7
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD1e-0859.7
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD1e-0859.7
NC_004193:375416:655820655820656611792Oceanobacillus iheyensis HTE831, complete genomesigma factor B1e-0859.7
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0859.7
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0859.7
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0859.7
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD1e-0859.7
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD1e-0859.7
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod2e-0859.3
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0859.3
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-0859.3
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-0859.3
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-0859.3
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor2e-0859.3
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD2e-0859.3
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD2e-0859.3
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD2e-0858.9
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor2e-0858.9
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor2e-0858.9
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0858.9
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD3e-0858.5
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD3e-0858.5
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein3e-0858.5
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor3e-0858.5
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)3e-0858.5
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-0858.5
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor4e-0858.2
NC_016148:576946:580786580786581376591Thermovirga lienii DSM 17291 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit4e-0858.2
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor4e-0858.2
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor3e-0858.2
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD5e-0857.8
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family5e-0857.8
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD6e-0857.8
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD7e-0857.4
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD7e-0857.4
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 707e-0857.4
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD7e-0857.4
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD7e-0857.4
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD6e-0857.4
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor9e-0857
NC_014932:1387818:138931913893191390230912Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma-32 factor9e-0857
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD8e-0857
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD8e-0857
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD8e-0857
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 708e-0857
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-0756.6
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD1e-0756.6
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor1e-0756.6
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor1e-0756.6
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0756.2
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit2e-0755.8
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)2e-0755.5
NC_012673:2023297:202719120271912027991801Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily3e-0755.5
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0755.5
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-0755.5
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor4e-0755.1
NC_013205:1123280:114581311458131146343531Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily4e-0754.7
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD4e-0754.7
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-0754.7
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family5e-0754.3
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor6e-0754.3
NC_008783:119758:141073141073141984912Bartonella bacilliformis KC583, complete genomeRNA polymerase sigma-32 factor1e-0653.5
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily9e-0753.5
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD9e-0753.5
NC_012121:1578190:159385115938511594621771Staphylococcus carnosus subsp. carnosus TM300, complete genomesigma factor B8e-0753.5
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0653.1
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD1e-0653.1
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-0653.1
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0652.8
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF2e-0652.8
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige1e-0652.8
NC_015275:1034230:104721210472121048036825Clostridium lentocellum DSM 5427 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-0652.4
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA2e-0652.4
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0652.4
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-0652.4
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD62e-0652.4
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD3e-0652
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0651.6
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A4e-0651.6
NC_006322:2658587:266257426625742663299726Bacillus licheniformis ATCC 14580, complete genomeSpoIIIC5e-0651.2
NC_006270:2657726:266171326617132662438726Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)5e-0651.2
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor5e-0651.2
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor5e-0651.2
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-0651.2
NC_014551:2510000:251515725151572515879723Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)7e-0650.8
NC_020272:1384525:140054414005441401266723Bacillus amyloliquefaciens IT-45, complete genomesporulation sigma factor SigK7e-0650.8
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)6e-0650.8
UCMB5137:2054735:206023320602332060961729Bacillus atrophaeus UCMB-5137sporulation sigma factor SigK6e-0650.8
CP002207:2169277:217149621714962172224729Bacillus atrophaeus 1942, complete genomesporulation sigma factor SigK6e-0650.8
NC_014639:2169277:217149621714962172224729Bacillus atrophaeus 1942 chromosome, complete genomesporulation sigma factor SigK6e-0650.8
NC_017191:2514401:251805925180592518787729Bacillus amyloliquefaciens XH7 chromosome, complete genomesporulation sigma factor SigK6e-0650.8
NC_017188:2512357:251601825160182516743726Bacillus amyloliquefaciens TA208 chromosome, complete genomesporulation sigma factor SigK6e-0650.8
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)7e-0650.4
NC_020410:2509057:251185125118512512573723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-K factor7e-0650.4
NC_009725:2517428:252185025218502522572723Bacillus amyloliquefaciens FZB42, complete genomeSpoIIIC7e-0650.4
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB8e-0650.4
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily9e-0650.4