Pre_GI: BLASTP Hits

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Query: NC_012225:1657248:1662700 Brachyspira hyodysenteriae WA1, complete genome

Start: 1662700, End: 1663245, Length: 546

Host Lineage: Brachyspira hyodysenteriae; Brachyspira; Brachyspiraceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Brachyspira hyodysenteriae is the causative agent of swine dysentery, which is a severe mucohemorrhagic diarrheal disease of pigs that has economic significance for pork-producing countries. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 21e-81301
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1996.3
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW2e-1479
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W2e-1479
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W2e-1479
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1479
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor2e-1479
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW2e-1479
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1478.2
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit4e-1477.8
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor9e-1476.6
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW1e-1376.3
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-1375.5
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor4e-1374.3
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor5e-1373.9
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE6e-1373.6
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1373.6
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1373.6
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor7e-1373.6
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1373.2
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1271.2
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1270.9
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family6e-1270.1
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.9
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E2e-1168.9
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)2e-1168.6
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor3e-1168.2
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor4e-1167.8
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU5e-1167.4
NC_014393:4541000:454485545448554545400546Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1167
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-1066.2
NC_016631:5378810:537881053788105379649840Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1065.9
NC_014171:1018338:103091910309191031539621Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase ECF-type sigma factor3e-1065.1
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor6e-1063.5
NC_011772:1011220:102153510215351022068534Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily8e-1063.2
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C1e-0962.8
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0962.4
NC_013166:1149760:116568711656871166253567Kangiella koreensis DSM 16069, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_010184:1017000:102909510290951029628534Bacillus weihenstephanensis KBAB4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0961.2
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0960.8
NC_015844:1188360:120641312064131207012600Zobellia galactanivorans, complete genomeRNA polymerase ECF-type sigma factor6e-0960.5
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0960.5
NC_009952:3596399:360359636035963604171576Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor8e-0960.1
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0960.1
NC_016779:991298:100202010020201002553534Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor1e-0859.3
NC_005957:1037205:104952510495251050058534Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma C factor1e-0859.3
NC_008600:1042477:105546210554621055995534Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0859.3
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.3
NC_006274:1040836:105320610532061053739534Bacillus cereus E33L, complete genomeRNA polymerase sigma C factor2e-0858.9
NC_017208:1050414:106404110640411064574534Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase ECF-type sigma factor2e-0858.9
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_005945:1008000:102009610200961020716621Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma C factor2e-0858.5
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor2e-0858.5
NC_007530:1007140:102029010202901020823534Bacillus anthracis str. 'Ames Ancestor', complete genomeRNA polymerase sigma C factor2e-0858.5
NC_003997:1007139:102029010202901020823534Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma C factor2e-0858.5
NC_012659:1008028:102019010201901020723534Bacillus anthracis str. A0248, complete genomeRNA polymerase factor sigma C2e-0858.5
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative3e-0858.2
NC_017200:1157835:117323311732331173853621Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RNA polymerase factor sigma C3e-0858.2
NC_009921:4757148:477616347761634776723561Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0858.2
NC_011773:1050000:106249510624951063028534Bacillus cereus AH820 chromosome, complete genomeRNA polymerase factor sigma C3e-0857.8
NC_013173:1712138:173775417377541738296543Desulfomicrobium baculatum DSM 4028, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0857.8
NC_014666:5449884:545245454524545453449996Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.4
NC_014210:5752651:575645957564595757085627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily6e-0857
NC_013730:4399643:441409444140944414645552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0856.6
NC_007333:3626510:363293636329363633556621Thermobifida fusca YX, complete genomeRNA polymerase sigma-70 factor9e-0856.6
NC_011969:1084000:109474110947411095211471Bacillus cereus Q1 chromosome, complete genomeRNA polymerase factor sigma c1e-0756.2
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0756.2
NC_021150:2315362:232812623281262328692567Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor SigX1e-0756.2
NC_012560:2315350:232811423281142328680567Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma-70 factor1e-0756.2
NC_012796:1645856:164776616477661648332567Desulfovibrio magneticus RS-1, complete genomeRNA polymerase ECF-type sigma factor1e-0756.2
NC_020133:3787844:380841538084153809068654Mycobacterium liflandii 128FXT, complete genomealternative RNA polymerase sigma factor1e-0755.8
NC_014655:2782707:278688527868852787409525Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma subunit, ecf family1e-0755.8
NC_014815:5888934:589354558935455894543999Micromonospora sp. L5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily2e-0755.5
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_013131:3473843:3473843347384334748471005Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.1
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.7
NC_015589:1899329:190623419062341906758525Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0754.7
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-0754.3
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit5e-0754.3
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor6e-0753.9
NC_013132:153163:170464170464171012549Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0753.5
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0753.1
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0753.1
NC_014483:4740214:475311047531104753685576Paenibacillus polymyxa E681 chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein9e-0753.1
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor1e-0652.8
NC_014150:1006000:102603910260391026611573Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_017243:685783:693812693812694471660Brachyspira intermedia PWS/A chromosome, complete genomeRpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma242e-0652.4
NC_011898:426951:428407428407428976570Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_010678:642769:664204664204664836633Ralstonia pickettii 12J chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_004193:3215500:321633632163363216875540Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor2e-0652
NC_016631:1329702:134785713478571348567711Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.2
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.8
NC_021184:3174500:318039731803973180936540Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family4e-0650.8
NC_015436:440033:442515442515443042528Spirochaeta coccoides DSM 17374 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.4
NC_019908:1296870:130311113031111303680570Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma-24 subunit7e-0650.4
NC_014330:1957725:196524019652401965806567Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma-24 subunit7e-0650.1
NC_015496:2279829:228225522822552282800546Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0650.1