Pre_GI: BLASTN Hits

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Query: NC_012207:477500 Mycobacterium bovis BCG str. Tokyo 172, complete genome

Start: 477500, End: 500767, Length: 23268

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Used for the production of BCG vaccine in Japan. Causative agent of classic bovine tuberculosis. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced. The pathology in cows is similar to the pathology of Mycobacterium tuberculosis in humans, with pulmonary TB leading to chronic debilitation, coughing, and further systemic spread to other organs. In addition, 1 to 2% of infected cows develop mycobacterial mastitis that results in shedding of the bacteria into the milk.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008769:50700050700053043423435Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome046080BLASTN svgBLASTP svg
NC_002677:36343236343238893225501Mycobacterium leprae TN, complete genome01174BLASTN svgBLASTP svg
NC_011896:36344836344838894925502Mycobacterium leprae Br4923, complete genome01174BLASTN svgBLASTP svg
NC_010612:83564883564886299927352Mycobacterium marinum M, complete genome01838BLASTN svgBLASTP svg
NC_002755:47287247287249645723586Mycobacterium tuberculosis CDC1551, complete genome023150BLASTN svgBLASTP svg
NC_015848:48350048350050998826489Mycobacterium canettii CIPT 140010059, complete genome024150BLASTN svgBLASTP svg
NC_019950:48188148188150600724127Mycobacterium canettii CIPT 140060008 complete genome027880BLASTN svgBLASTP svg
NC_000962:47581647581649961923804Mycobacterium tuberculosis H37Rv, complete genome045950BLASTN svgBLASTP svg
NC_009525:47709347709350092923837Mycobacterium tuberculosis H37Ra, complete genome045950BLASTN svgBLASTP svg
NC_009565:47950047950050278923290Mycobacterium tuberculosis F11, complete genome045970BLASTN svgBLASTP svg
NC_002945:47683547683550063823804Mycobacterium bovis AF2122/97, complete genome046050BLASTN svgBLASTP svg
NC_011896:332939*33293935403321095Mycobacterium leprae Br4923, complete genome3e-163583BLASTN svgBLASTP svg
NC_002677:332923*33292335401721095Mycobacterium leprae TN, complete genome3e-163583BLASTN svgBLASTP svg
NC_012522:2031786*2031786206157229787Rhodococcus opacus B4, complete genome3e-46194BLASTN svgBLASTP svg
NC_013159:1807599*1807599183475127153Saccharomonospora viridis DSM 43017, complete genome4e-30141BLASTN svgBLASTP svg
NC_008271:35909359096246126553Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence1e-29139BLASTN svgBLASTP svg
NC_008268:2313583*2313583234448830906Rhodococcus sp. RHA1, complete genome1e-29139BLASTN svgBLASTP svg
NC_000962:32884643288464331029721834Mycobacterium tuberculosis H37Rv, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002755:32827853282785330371920935Mycobacterium tuberculosis CDC1551, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002945:32462783246278326609919822Mycobacterium bovis AF2122/97, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008769:32424533242453326356021108Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009525:33004563300456332228921834Mycobacterium tuberculosis H37Ra, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009565:32999373299937332177021834Mycobacterium tuberculosis F11, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012207:32374403237440325728519846Mycobacterium bovis BCG str. Tokyo 172, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015848:33437313343731336691823188Mycobacterium canettii CIPT 140010059, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_019950:33064193306419333122724809Mycobacterium canettii CIPT 140060008 complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010694:13242501324250134559221343Erwinia tasmaniensis, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008271:14084614084616654625701Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_013595:9994000*99940001001201918020Streptosporangium roseum DSM 43021, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002516:89100089100091357122572Pseudomonas aeruginosa PAO1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000962:18708421870842189534224501Mycobacterium tuberculosis H37Rv, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002755:18596301859630187892619297Mycobacterium tuberculosis CDC1551, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002945:18562281856228188073824511Mycobacterium bovis AF2122/97, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008769:18761091876109190061624508Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009525:18723601872360189686024501Mycobacterium tuberculosis H37Ra, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009565:18662141866214189074224529Mycobacterium tuberculosis F11, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012207:18480911848091186924521155Mycobacterium bovis BCG str. Tokyo 172, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015848:18966601896660192209125432Mycobacterium canettii CIPT 140010059, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019950:18708631870863189629425432Mycobacterium canettii CIPT 140060008 complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018681:1021063*1021063104680525743Nocardia brasiliensis ATCC 700358 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015859:10691161069116109541926304Corynebacterium variabile DSM 44702 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014831:86661486661489112124508Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg