Pre_GI: BLASTP Hits

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Query: NC_012125:894955:930693 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 930693, End: 931715, Length: 1023

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:804288:8311148311148321451032Dickeya dadantii Ech586, complete genomephage major capsid protein, P2 family2e-149528
NC_014500:894136:9303699303699314451077Dickeya dadantii 3937 chromosome, complete genomehypothetical protein9e-149526
NC_013892:992811:99951599951510005461032Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-135481
NC_008750:3314309:3325044332504433260871044Shewanella sp. W3-18-1, complete genomephage major capsid protein, P2 family1e-90333
NC_009348:4135002:413751541375154138480966Aeromonas salmonicida subsp. salmonicida A449, complete genomePhage major capsid protein, P21e-85316
NC_015224:3291736:3310516331051633115171002Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Major capsid protein5e-81301
NC_011083:2542876:2560452256045225614561005Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,major capsid protein1e-78293
CP002797:2472908:2476906247690624779101005Escherichia coli NA114, complete genomePhage major capsid protein2e-77289
NC_009778:2951207:2971685297168529726861002Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-75280
NC_014121:1101093:111163011116301112295666Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completemajor capsid protein7e-58224
NC_011883:269497:2895652895652905991035Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,phage major capsid protein, P2 family7e-28124
NC_007963:1582089:1584712158471215857311020Chromohalobacter salexigens DSM 3043, complete genomephage major capsid protein, P21e-27124
NC_012724:147454:1492801492801502931014Burkholderia glumae BGR1 chromosome 1, complete genomeGp2, phage major capsid protein, P2 family protein7e-27121
NC_003902:3514000:3532850353285035338661017Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related major capsid protein2e-26120
NC_014837:3766426:3769083376908337701441062Pantoea sp. At-9b chromosome, complete genomephage major capsid protein, P2 family1e-26120
NC_020209:3262000:3277183327718332781901008Pseudomonas poae RE*1-1-14, complete genomeputative phage capsid-like protein8e-26118
NC_013956:3525711:3526942352694235281621221Pantoea ananatis LMG 20103 chromosome, complete genomeN9e-26117
NC_008751:3214000:3214791321479132158161026Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage major capsid protein, P2 family2e-25116
NC_008751:1762562:1763299176329917643241026Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage major capsid protein, P2 family2e-25116
NC_010943:325739:3257393257393267551017Stenotrophomonas maltophilia K279a, complete genomeputative capsid proteins precursor (gpn) [contains: minor capsid protein h1; minor capsid protein h2; major capsid protein n*]7e-25115
NC_009656:5185704:5203018520301852040401023Pseudomonas aeruginosa PA7 chromosome, complete genomeP2 family phage major capsid protein8e-25114
NC_017059:3688688:3691370369137036924071038Rhodospirillum photometricum DSM 122, complete genomePhage major capsid protein, P2 family2e-24113
NC_020260:312805:3321643321643333121149Cronobacter sakazakii Sp291, complete genomemajor capsid protein6e-24111
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-23110
NC_010694:614985:6402176402176413861170Erwinia tasmaniensis, complete genomePutative major capsid protein4e-23108
NC_017047:4037674:4056717405671740577811065Rahnella aquatilis HX2 chromosome, complete genomephage major capsid protein, P2 family4e-23108
NC_015856:1152021:1169436116943611704431008Collimonas fungivorans Ter331 chromosome, complete genomemajor capsid protein6e-23108
NC_015061:1598920:1619756161975616208201065Rahnella sp. Y9602 chromosome, complete genomephage major capsid protein, P2 family1e-22107
NC_006511:2677964:2679379267937926804431065Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative major capsid protein6e-22105
NC_003198:4453457:4491144449114444922081065Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative major capsid protein6e-22105
NC_012724:1892000:1906688190668819077251038Burkholderia glumae BGR1 chromosome 1, complete genomeP2 family phage major capsid protein3e-21102
NC_011149:2802199:2804323280432328053841062Salmonella enterica subsp. enterica serovar Agona str. SL483,phage major capsid protein, P2 family9e-21101
NC_011205:2938356:2939570293957029406281059Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage major capsid protein, P2 family4e-2099
NC_012660:1737423:173976217397621740658897Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage capsid-like protein6e-2098.6
NC_014306:1244721:1260841126084112619021062Erwinia billingiae Eb661, complete genomemajor capsid protein6e-2098.6
NC_017046:2869873:2871088287108828721701083Salmonella enterica subsp. enterica serovar Typhimurium str. 798major capsid protein1e-1997.1
NC_016857:2871689:2872346287234628734281083Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74major capsid-like protein1e-1997.1
NC_016810:2871689:2872346287234628734281083Salmonella enterica subsp. enterica serovar Typhimurium strputative major capsid protein1e-1997.1
NC_020181:5182568:5182568518256851836351068Enterobacter aerogenes EA1509E, complete genomePhage major capsid protein2e-1996.7
NC_012962:4942000:4952422495242249535371116Photorhabdus asymbiotica, complete genomemajor capsid protein3e-1996.3
NC_016845:1773416:1788534178853417895921059Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,minor capsid protein H1 and H2, major capsid protein N*4e-1995.9
NC_013282:3389619:3391867339186733929551089Cronobacter turicensis, complete genomeCapsid proteins6e-1995.1
NC_007613:761234:7761987761987772561059Shigella boydii Sb227, complete genomemajor capsid protein1e-1894.4
NC_014306:103545:1222531222531233021050Erwinia billingiae Eb661, complete genomeMajor phage capsid protein3e-1892.8
NC_012917:3565268:3589444358944435905711128Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage major capsid protein, P2 family2e-1790.1
NC_020211:4598217:4600372460037246015831212Serratia marcescens WW4, complete genomephage major capsid protein7e-1788.6
NC_005773:5636606:563832556383255639164840Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, major capsid protein, P2 family1e-1687.8
NC_008800:1870596:1871335187133518723811047Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,major phage capsid protein3e-1686.7
NC_016818:1605918:1623578162357816246781101Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage major capsid protein, P2 family2e-1686.7
NC_014562:2871765:2874224287422428752251002Pantoea vagans C9-1 chromosome, complete genomeCapsid proteins precursor5e-1685.5
NC_014323:992978:9936979936979947401044Herbaspirillum seropedicae SmR1 chromosome, complete genomemajor capsid [Bacteriophage phi CTX] protein9e-1684.7
NC_017047:1551836:1570330157033015714301101Rahnella aquatilis HX2 chromosome, complete genomephage major capsid protein, P2 family3e-1583.2
NC_007712:433500:453227453227453805579Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail tube protein5e-1582
NC_009648:3803622:3821804382180438228621059Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage major capsid protein2e-1480.1
NC_005085:659378:676561676561677541981Chromobacterium violaceum ATCC 12472, complete genomeprobable major capsid protein of prophage P22e-0860.1