Pre_GI: BLASTP Hits

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Query: NC_012125:894955:921486 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 921486, End: 921989, Length: 504

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2713937:271983927198392720369531Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein6e-91332
NC_006511:2718401:272430327243032724833531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene6e-91332
NC_011080:2870428:287551428755142876017504Salmonella enterica subsp. enterica serovar Newport str. SL254,regulatory protein CII bacteriophage 1862e-87320
NC_015061:2770856:277872327787232779232510Rahnella sp. Y9602 chromosome, complete genomeregulatory CII family protein1e-52205
NC_014500:894136:920427920427920936510Dickeya dadantii 3937 chromosome, complete genomeRegulatory protein CII1e-45182
NC_013592:804288:822485822485822994510Dickeya dadantii Ech586, complete genomeregulatory CII family protein7e-45179
NC_006155:2116834:212213021221302122639510Yersinia pseudotuberculosis IP 32953, complete genomeregulatory protein CII bacteriophage 1863e-44177
NC_014306:1244721:125003212500321250541510Erwinia billingiae Eb661, complete genomePhage regulatory CII family protein6e-44176
NC_014837:2458780:247114224711422471651510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein2e-42171
NC_012917:3565268:357732935773293577838510Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeregulatory CII family protein1e-41169
NC_020211:4598217:461323446132344613743510Serratia marcescens WW4, complete genomephage regulatory CII family protein2e-40164
NC_013956:3525711:354228535422853542794510Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-39160
NC_015061:596247:612574612574613080507Rahnella sp. Y9602 chromosome, complete genomeregulatory protein CII bacteriophage 1867e-39159
NC_013282:3389619:340414834041483404657510Cronobacter turicensis, complete genomeRegulatory protein CII2e-38158
NC_006511:2677964:269293126929312693440510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage regulatory protein1e-37155
NC_003198:4453457:450470845047084505217510Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage regulatory protein1e-37155
NC_011147:2676972:268846726884672688976510Salmonella enterica subsp. enterica serovar Paratyphi A strphage regulatory protein1e-37155
NC_011742:2823000:282843128284312828940510Escherichia coli S88 chromosome, complete genomeregulatory protein cII9e-38155
NC_003197:2870268:287527828752782875787510Salmonella typhimurium LT2, complete genomehypothetical protein8e-38155
NC_011149:2802199:281827228182722818781510Salmonella enterica subsp. enterica serovar Agona str. SL483,phage regulatory protein8e-38155
NC_016860:2896254:289884428988442899353510Salmonella enterica subsp. enterica serovar Typhimurium strphage regulatory protein8e-38155
NC_020260:312805:319980319980320489510Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-37154
NC_009436:1466580:147853314785331479042510Enterobacter sp. 638, complete genomephage regulatory CII family protein3e-37154
NC_009436:3807420:381195838119583812467510Enterobacter sp. 638, complete genomephage regulatory CII family protein2e-37154
NC_011601:846358:857051857051857560510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein5e-37153
NC_010694:614985:630293630293630802510Erwinia tasmaniensis, complete genomePhage regulatory protein2e-36151
NC_009648:3803622:383244238324423832951510Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein for establishment of lysogeny2e-36151
NC_017046:2869873:288469528846952885204510Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage regulatory protein3e-36150
NC_016857:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage regulatory protein3e-36150
NC_016810:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage regulatory protein3e-36150
NC_014837:3766426:378110237811023781611510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein1e-35149
NC_016845:4046142:405227840522784052787510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp311e-35148
NC_020181:5182568:519431351943135194822510Enterobacter aerogenes EA1509E, complete genomeRegulatory protein CII3e-34144
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein7e-33139
NC_011205:2938356:295352829535282953974447Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-32137
NC_014562:2871765:287632228763222876831510Pantoea vagans C9-1 chromosome, complete genomeRegulatory protein CII3e-29127
NC_009348:1663870:166795316679531668474522Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein4e-22103
NC_009348:4135002:415310241531024153635534Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein1e-2098.6
NC_015424:2726223:275689127568912757400510Aeromonas veronii B565 chromosome, complete genomephage protein2e-1995.1
NC_009784:253852:267391267391267930540Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein1e-1582.4
NC_016628:373815:386881386881387420540Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage regulatory protein (CII)1e-1582
NC_016745:1892500:189806918980691898605537Oceanimonas sp. GK1 chromosome, complete genomephage protein9e-1476.3