Pre_GI: BLASTP Hits

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Query: NC_012125:3905782:3918121 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 3918121, End: 3918354, Length: 234

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3933848:394496339449633945250288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-37154
NC_011080:3941909:395424839542483954535288Salmonella enterica subsp. enterica serovar Newport str. SL254,putative IIB component of PTS system2e-37154
NC_010102:3919999:393175839317583932045288Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-37154
NC_011149:3895921:390817639081763908463288Salmonella enterica subsp. enterica serovar Agona str. SL483,putative IIB component of PTS system2e-37154
NC_006905:3913988:392333139233313923618288Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein2e-37154
NC_003198:3855157:386484538648453865132288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIB component2e-37154
NC_011083:3985618:399787339978733998160288Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative IIB component of PTS system2e-37154
NC_003197:3971905:398366439836643983951288Salmonella typhimurium LT2, complete genomeputative periplasmic protein2e-37154
NC_004631:3841975:385033538503353850622288Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIB component of PTS system2e-37154
NC_006511:3759550:377179637717963772083288Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIB component2e-37154
NC_016860:3995445:400656040065604006847288Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system IIB protein2e-37154
NC_016857:3993864:400497840049784005265288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system IIB component2e-37154
NC_016856:3985597:399735639973563997643288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-37154
NC_016810:3993863:400497740049774005264288Salmonella enterica subsp. enterica serovar Typhimurium strputative IIB component of PTS system2e-37154
NC_011147:3755725:376747537674753767762288Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIB2e-37154
NC_011094:3853036:386537638653763865663288Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system transporter subunit IIB2e-37154
NC_017046:3991551:400380540038054004038234Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter subunit IIB4e-37152
NC_014363:427393:444980444980445261282Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1992.8
NC_015061:3725921:374404637440463744330285Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase4e-0960.1
NC_017047:3793000:380869238086923808976285Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB4e-0960.1
NC_016818:3736213:375149537514953751779285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIB1e-0858.5
NC_009617:234782:252522252522252800279Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphotransferase system, lactose/cellobiose-specific IIB subunit6e-0856.2
NC_012967:2105251:212764221276422127926285Escherichia coli B str. REL606 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB2e-0754.3
NC_013008:2824511:284359828435982843882285Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB2e-0754.3
NC_004431:2444972:246432424643242464608285Escherichia coli CFT073, complete genomePTS system, galactitol-specific IIB component2e-0754.3
NC_008253:2198583:221485922148592215143285Escherichia coli 536, complete genomePTS system, galactitol-specific IIB component9e-0752.4
NC_015389:616430:624853624853625134282Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIB component, Gat family8e-0649.3