Pre_GI: BLASTP Hits

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Query: NC_012125:373630:374354 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 374354, End: 375655, Length: 1302

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:346915:3590103590103603351326Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein0880
NC_006905:401154:4242444242444255691326Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbriae; usher0879
NC_011083:403022:4268324268324281571326Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative fimbrial usher0879
NC_011080:383441:3841653841653854901326Salmonella enterica subsp. enterica serovar Newport str. SL254,putative fimbrial usher0879
NC_003197:367430:3797053797053810301326Salmonella typhimurium LT2, complete genomeputative fimbrial usher0878
NC_016810:366908:3791833791833805081326Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial protein0878
NC_016856:365665:3803903803903817151326Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial usher0878
NC_016857:366908:3791833791833805081326Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial usher0878
NC_016860:397138:4210964210964224211326Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial usher protein0878
NC_016863:367404:3796793796793810041326Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial usher0878
NC_017046:366905:3791803791803805051326Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial protein0878
NC_011149:361765:3624893624893638141326Salmonella enterica subsp. enterica serovar Agona str. SL483,putative fimbrial usher0877
NC_011205:371001:3830963830963844211326Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial usher0877
NC_011274:376970:3776943776943790191326Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein0877
NC_016831:2627515:2643545264354526448701326Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative fimbrial protein0877
NC_011147:2463299:2479264247926424805891326Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein0876
NC_006511:2467763:2483728248372824850531326Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative fimbrial protein0876
NC_003198:378844:3795683795683808931326Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative fimbrial protein0875
NC_004631:2584244:2600220260022026015451326Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrial protein0875
NC_016832:2581145:2597121259712125984461326Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,fimbriae0875
NC_010102:2721374:2737408273740827387331326Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0874
NC_011094:380428:3924753924753938001326Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial usher0874
NC_009648:293052:2954322954322967661335Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative fimbriae; usher1e-171602
NC_014562:1402863:1414773141477314161011329Pantoea vagans C9-1 chromosome, complete genomehypothetical protein1e-161569
NC_013716:3109700:31097003109700312121611517Citrobacter rodentium ICC168, complete genomeputative fimbrial adhesin3e-144511
NC_006905:1961774:197473419747341975258525Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbriae; usher8e-80298
NC_012125:1897611:191746819174681917992525Salmonella enterica subsp. enterica serovar Paratyphi C strainfimbriae usher protein3e-79296
NC_010634:166900:1804631804631818301368Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-71269
NC_006155:172313:1858691858691872361368Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-71269
NC_014618:1700784:1704521170452117058641344Enterobacter cloacae SCF1 chromosome, complete genomefimbrial protein domain-containing protein9e-56218
NC_020829:1307736:1328605132860513299721368Pseudomonas denitrificans ATCC 13867, complete genomefimbrial subunit2e-55216
NC_007973:1785985:1798317179831717997441428Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein3e-53209
NC_008463:5313527:5317504531750453188501347Pseudomonas aeruginosa UCBPP-PA14, complete genomefimbrial subunit1e-52207
NC_010159:2164500:2199113219911322003901278Yersinia pestis Angola, complete genomehypothetical protein6e-25115
NC_017160:2362002:2364654236465423659311278Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-25115
NC_004088:2640440:2643047264304726443961350Yersinia pestis KIM, complete genomehypothetical protein5e-25115
NC_008150:1420825:1455481145548114568301350Yersinia pestis Antiqua, complete genomehypothetical protein5e-25115
NC_005810:1794490:1829146182914618304951350Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-25115
NC_003143:2137945:2172402217240221737511350Yersinia pestis CO92, complete genomehypothetical protein5e-25115
NC_009381:1362471:1361125136112513624741350Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-25115
NC_015224:1914833:1930509193050919318431335Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-24114
NC_010694:3178842:3182162318216231834811320Erwinia tasmaniensis, complete genomePutative adhesin MrkD (involved in the expression of type III fimbriae)4e-21102
NC_002655:1413244:1426377142637714277111335Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1687.4
NC_002695:1329472:1342605134260513439391335Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein2e-1687.4
NC_013008:1271621:1285169128516912865031335Escherichia coli O157:H7 str. TW14359 chromosome, complete genomefimbrial-like adhesion protein2e-1687.4
NC_013941:1314158:1327289132728913286231335Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1687
NC_011353:1271335:1284883128488312860671185Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeouter membrane protein3e-1687
NC_017154:2137500:217231121723112173246936Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-1480.9
NC_010694:436500:4478584478584491471290Erwinia tasmaniensis, complete genomehypothetical protein7e-1479