Pre_GI: BLASTP Hits

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Query: NC_012125:326909:340609 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 340609, End: 341079, Length: 471

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:326517:340740340740341210471Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbriae subunit5e-82302
NC_011149:309556:327395327395327865471Salmonella enterica subsp. enterica serovar Agona str. SL483,putative fimbrial structural subunit3e-80296
NC_004631:2615908:263447826344782634948471Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrial structural subunit1e-79295
NC_003198:331314:346165346165346635471Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative fimbrial structural subunit1e-79295
NC_003197:332086:346098346098346568471Salmonella typhimurium LT2, complete genomeputative fimbrial subunit1e-79295
NC_016810:329849:345576345576346046471Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial structural subunit1e-79295
NC_016831:2667561:267783026778302678300471Salmonella enterica subsp. enterica serovar Gallinarum/pullorumfimbrial structural subunit1e-79295
NC_016832:2612809:263137826313782631848471Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fimbrial structural subunit1e-79295
NC_016856:332771:346783346783347253471Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial subunit1e-79295
NC_016857:329849:345576345576346046471Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial structural subunit1e-79295
NC_016860:332087:346099346099346569471Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial structural protein1e-79295
NC_016863:332060:346072346072346542471Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial subunit1e-79295
NC_017046:329847:345574345574346044471Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial structural subunit1e-79295
NC_011094:334267:347040347040347510471Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial structural subunit1e-79295
NC_010102:2762304:277073627707362771206471Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-80295
NC_011205:329155:349718349718350188471Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial structural subunit1e-78291
NC_011080:333121:350605350605351075471Salmonella enterica subsp. enterica serovar Newport str. SL254,putative fimbrial structural subunit9e-79291
NC_011294:311796:325633325633326103471Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial structural subunit2e-78290
NC_006511:2540500:255920525592052559669465Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-77286
NC_020064:3998715:404438340443834044820438Serratia marcescens FGI94, complete genomeEnterobacteria AfaD invasin protein5e-1477
NC_011080:4543000:455989745598974560148252Salmonella enterica subsp. enterica serovar Newport str. SL254,putative invasin protein7e-0856.2
NC_011294:4560902:457406145740614574513453Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial adhesin subunit5e-0753.5
NC_011205:4718239:473139847313984731850453Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial adhesin subunit5e-0753.5