Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2980501 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2980501, End: 2980677, Length: 177

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2987863:300011930001193000295177Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-26117
NC_010102:2967464:301121230112123011388177Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-26116
NC_011080:2982346:302472330247233025160438Salmonella enterica subsp. enterica serovar Newport str. SL254,probable transposase for transposon6e-26116
NC_016863:2974333:301670930167093016897189Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-25114
NC_016856:3026426:306845630684563068632177Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-25114
NC_011094:2913500:295345629534562953680225Salmonella enterica subsp. enterica serovar Schwarzengrund strtransposase4e-24109
NC_007712:1712667:172109317210931722031939Sodalis glossinidius str. 'morsitans', complete genometransposase9e-22102
NC_007712:1893066:191195019119501912873924Sodalis glossinidius str. 'morsitans', complete genometransposase1e-21102
NC_007712:1954808:196808419680841969007924Sodalis glossinidius str. 'morsitans', complete genometransposase3e-21100
NC_016857:3028421:307079530707953070947153Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-2098.2
NC_017046:3027161:306953530695353069687153Salmonella enterica subsp. enterica serovar Typhimurium str. 7981e-2098.2
NC_007712:1262593:128007712800771280976900Sodalis glossinidius str. 'morsitans', complete genometransposase5e-2096.3
NC_016860:3029272:307164930716493071789141Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein3e-1994
NC_016831:2867766:290850529085052908645141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative cytoplasmic protein7e-1992.8
NC_011149:2912219:295664929566492956789141Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-1892
NC_011083:3009760:302273430227343022874141Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1788.6
NC_011205:3078732:309096730909673091107141Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1788.6
NC_016944:514742:532907532907533395489Vibrio cholerae IEC224 chromosome I, complete sequencetransposase3e-1684
NC_012668:83641:869528695287440489Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase3e-1684
NC_016832:2859491:287174828717482871894147Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase3e-1683.6
NC_016445:338288:351750351750352187438Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase1e-1582
NC_016944:859492:871270871270871707438Vibrio cholerae IEC224 chromosome I, complete sequencetransposase1e-1582
NC_012731:3593000:359636535963653597288924Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase2e-1581.3
NC_012731:2739964:274684927468492747772924Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase2e-1581.3
NC_006625:1:524352436211969Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceputative transposase, IS42e-1581.3
NC_006625:63342:765797657977547969Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceputative transposase, IS42e-1581.3
NC_004347:3437369:344041234404123441335924Shewanella oneidensis MR-1, complete genomeISSod12, transposase3e-1580.9
NC_004459:3243987:325893332589333259151219Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase2e-1580.9
NC_009783:1665610:166918316691831670103921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-1580.9
NC_013508:2130681:215414121541412155064924Edwardsiella tarda EIB202, complete genomeIS903 transposase2e-1580.9
NC_013716:2139952:216970721697072170675969Citrobacter rodentium ICC168, complete genomeIS102 transposase2e-1580.9
NC_013716:3512950:352588535258853526853969Citrobacter rodentium ICC168, complete genomeIS102 transposase2e-1580.9
NC_013716:3708415:371318037131803714148969Citrobacter rodentium ICC168, complete genomeIS102 transposase2e-1580.9
NC_013716:3109700:312436631243663125334969Citrobacter rodentium ICC168, complete genomeIS102 transposase2e-1580.9
NC_009783:1665610:167852716785271679447921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-1580.5
NC_016845:4498097:451352345135234514491969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-1580.1
NC_016845:3238507:324804732480473249015969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-1580.1
NC_016845:1285435:131517113151711316139969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-1580.1
NC_011740:4007000:401936540193654020333969Escherichia fergusonii ATCC 35469, complete genometransposase, IS903.B4e-1580.1
NC_016845:575123:586054586054587022969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-1580.1
NC_015633:1702000:171285717128571713777921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase4e-1580.1
NC_015637:325561:332888332888333808921Vibrio anguillarum 775 chromosome chromosome II, complete sequencetransposase4e-1580.1
NC_015633:338000:347226347226348146921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase4e-1580.1
NC_012779:1449500:150017915001791501117939Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1580.1
NC_009999:38832:580935809359016924Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase IS4 family protein3e-1580.1
NC_011663:4943179:496783949678394968762924Shewanella baltica OS223 chromosome, complete genometransposase IS4 family protein3e-1580.1
NC_014121:677799:687246687246687704459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase6e-1579.7
NC_009649:94871:105803105803106771969Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,IS903 transposase5e-1579.7
NC_014121:4577324:459277545927754593449675Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase7e-1579.3
NC_010498:2278306:228207822820782283001924Escherichia coli SMS-3-5, complete genomeIS903 transposase7e-1579.3
NC_011283:2103500:211099221109922111915924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase7e-1579.3
NC_011283:2836000:287871928787192879642924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase7e-1579.3
NC_011283:4438500:447050644705064471429924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase7e-1579.3
NC_011283:5170683:517526251752625176185924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase7e-1579.3
NC_009665:693478:721190721190722113924Shewanella baltica OS185 chromosome, complete genometransposase IS4 family protein6e-1579.3
NC_009838:81913:115878115878116801924Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceIS4 transposase6e-1579.3
NC_016901:724000:751852751852752775924Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein9e-1579
NC_009997:726840:755480755480756403924Shewanella baltica OS195, complete genometransposase IS4 family protein9e-1579
NC_009997:4091371:409715840971584098078921Shewanella baltica OS195, complete genometransposase IS4 family protein1e-1478.6
NC_009997:2069894:206989420698942070814921Shewanella baltica OS195, complete genometransposase IS4 family protein1e-1478.6
NC_016901:2070121:207048220704822071402921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein1e-1478.6
NC_016901:4039335:404512240451224046042921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein1e-1478.6
NC_009648:1487692:151184415118441512812969Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transposase, IS41e-1478.2
NC_014121:1589389:160314316031431604111969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-1478.2
NC_014121:1822895:184016718401671841135969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-1478.2
NC_014121:489500:500709500709501677969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1478.2
NC_014121:4577324:459103545910354592003969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1478.2
NC_014121:1101093:110277211027721103740969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-1478.2
NC_014121:5000069:500927050092705010238969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1478.2
NC_014121:1038554:105273510527351053703969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-1478.2
NC_014121:2330451:235490823549082355876969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1478.2
NC_014121:3188928:319494331949433195911969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-1478.2
NC_005139:2201820:223463522346352235555921Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase5e-1476.6
NC_005139:2201820:224555622455562245942387Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase5e-1476.3
NC_016602:173314:195551195551196471921Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase9e-1475.5
NC_008150:4634695:463953546395354639792258Yersinia pestis Antiqua, complete genomehypothetical protein1e-1374.7
NC_015424:1603000:162038616203861621336951Aeromonas veronii B565 chromosome, complete genomeputative transposase tnpR391B2e-1167.8
NC_015424:2316228:233698223369822337554573Aeromonas veronii B565 chromosome, complete genomeputative transposase2e-1167.8
NC_007712:4067500:407411440741144074980867Sodalis glossinidius str. 'morsitans', complete genometransposase5e-1166.2
NC_009457:351512:364974364974365114141Vibrio cholerae O395 chromosome 2, complete sequencetransposase3e-1063.9
NC_009930:4909:9736973610665930Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencetransposase, IS4 family3e-1063.5
NC_009052:2512373:252449125244912525408918Shewanella baltica OS155, complete genometransposase, IS4 family protein5e-0959.7
NC_009997:726840:750222750222750563342Shewanella baltica OS195, complete genometransposase, IS4 family protein7e-0959.3
NC_007650:84140:9582395823968931071Burkholderia thailandensis E264 chromosome II, complete sequencetransposase2e-0858.2
NC_004605:1385444:139308113930811393929849Vibrio parahaemolyticus RIMD 2210633 chromosome II, completetransposase1e-0755.5
NC_015703:5013615:5030182503018250311981017Runella slithyformis DSM 19594 chromosome, complete genometransposase IS4 family protein1e-0755.5
NC_013194:2115000:211975521197552120723969Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein5e-0753.1
NC_006138:23902:357173571735968252Desulfotalea psychrophila LSv54, complete genometransposase1e-0652
NC_015510:1012195:102635410263541027334981Haliscomenobacter hydrossis DSM 1100 chromosome, complete genometransposase IS4 family protein1e-0651.6
NC_010404:55908:709407094071872933Acinetobacter baumannii plasmid p3ABAYE, complete sequencetransposase2e-0651.2