Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2979614 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2979614, End: 2979904, Length: 291

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2919906:293035429303542930644291Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein2e-48191
NC_003198:2856596:289770528977052897995291Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-48191
NC_004631:2872192:288356228835622883852291Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-48191
NC_011274:2909799:292115829211582921448291Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein9e-48188
NC_003197:3005842:304733230473323047622291Salmonella typhimurium LT2, complete genomeputative ABC-type transporter8e-48188
NC_016810:3028421:306990830699083070198291Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 protein8e-48188
NC_016856:3026426:306756930675693067859291Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative ABC-type transporter8e-48188
NC_016857:3028421:306990830699083070198291Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative ABC-type transporter8e-48188
NC_016863:2974333:301582230158223016112291Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative ABC-type transporter8e-48188
NC_006511:2819128:286025028602502860531282Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-46185
NC_006905:2987863:299924129992412999522282Salmonella enterica subsp. enterica serovar Choleraesuis strputative ABC-type transport system1e-46185
NC_011080:2982346:302384530238453024126282Salmonella enterica subsp. enterica serovar Newport str. SL254,putative ABC-type transport system1e-46185
NC_011083:3009760:302185630218563022137282Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative ABC-type transport system1e-46185
NC_011149:2912219:295577129557712956052282Salmonella enterica subsp. enterica serovar Agona str. SL483,putative ABC-type transport system1e-46185
NC_010102:2967464:301033430103343010615282Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-46185
NC_011147:2814664:285578628557862856067282Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-46185
NC_011205:3078732:309008930900893090370282Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ABC transporter1e-46185
NC_016860:3029272:307077130707713071052282Salmonella enterica subsp. enterica serovar Typhimurium strABC transporter permease5e-46182
NC_016831:2867766:290766629076662907908243Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein6e-39159
NC_016832:2859491:287093628709362871151216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Pathogenicity island protein7e-34142
NC_017046:3027161:306872330687233068938216Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island 1 protein3e-33140
NC_015963:117178:148439148439148708270Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencehypothetical protein9e-0958.9
NC_012108:2874831:287760128776012877912312Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-0755.5
NC_013422:1755875:175968917596891759970282Halothiobacillus neapolitanus c2, complete genomeProtein of unknown function DUF17781e-0755.1
NC_010511:1074557:108116410811641081532369Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-0754.3
NC_008752:3007073:302190430219043022182279Acidovorax avenae subsp. citrulli AAC00-1, complete genomeconserved hypothetical protein, with unknown function2e-0651.2