Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2978299 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2978299, End: 2978742, Length: 444

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:51000:701557015570598444Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-58223
NC_011149:2912219:295291429529142953357444Salmonella enterica subsp. enterica serovar Agona str. SL483,cell adherance/invasion protein2e-68257
NC_006905:2987863:299791629979162998359444Salmonella enterica subsp. enterica serovar Choleraesuis strinvasion protein3e-69259
NC_011205:3078732:308878530887853089228444Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cell adherance/invasion protein2e-68257
NC_011294:2919906:292904829290482929491444Salmonella enterica subsp. enterica serovar Enteritidis strcell adherance/invasion protein5e-68256
NC_011274:2909799:291985229198522920295444Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell adherance/invasion protein2e-68257
NC_016831:2867766:290631229063122906755444Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell adherance/invasion protein2e-68257
NC_011083:3009760:301890330189033019346444Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cell adherance/invasion protein2e-68257
NC_011080:2982346:302089230208923021335444Salmonella enterica subsp. enterica serovar Newport str. SL254,cell adherance/invasion protein9e-69258
NC_011147:2814664:285446028544602854903444Salmonella enterica subsp. enterica serovar Paratyphi A strcell adherance/invasion protein2e-68257
NC_006511:2819128:285892428589242859367444Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell adherance/invasion protein2e-68257
NC_010102:2967464:300768630076863007814129Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1685.1
NC_011094:2913500:295158529515852952028444Salmonella enterica subsp. enterica serovar Schwarzengrund strcell adherance/invasion protein2e-68257
NC_003198:2856596:289638828963882896831444Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell adherance/invasion protein2e-68257
NC_016832:2859491:286954428695442869987444Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Invasion lipoprotein invH2e-68257
NC_004631:2872192:288224528822452882688444Salmonella enterica subsp. enterica serovar Typhi Ty2, completecell adherance/invasion protein2e-68257
NC_016810:3028421:306696530669653067408444Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane lipoprotein2e-68256
NC_016860:3029272:306781930678193068262444Salmonella enterica subsp. enterica serovar Typhimurium strcell adherance/invasion protein2e-68256
NC_016856:3026426:306462630646263065069444Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex outer membrane lipoprotein precursor2e-68256
NC_017046:3027161:306570530657053066148444Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane lipoprotein2e-68256
NC_016857:3028421:306693230669323067408477Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cell adherance/invasion protein1e-68257
NC_016863:2974333:301287930128793013322444Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex outer membrane lipoprotein precursor2e-68256
NC_003197:3005842:304438930443893044832444Salmonella typhimurium LT2, complete genomeneedle complex outer membrane lipoprotein precursor2e-68256