Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:2938519:2963025 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2963025, End: 2964806, Length: 1782

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2960260:2982642298264229844231782Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein0994
NC_016857:3028421:3051690305169030534711782Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cell invasion protein0975
NC_010694:2138000:2150656215065621525661911Erwinia tasmaniensis, complete genomeCell invasion protein1e-23111
NC_016860:3029272:3052544305254430543251782Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein0975
NC_013961:1622616:1651134165113416530351902Erwinia amylovora, complete genomeCell invasion protein SipB5e-1893.2
NC_011094:2913500:2936310293631029380911782Salmonella enterica subsp. enterica serovar Schwarzengrund strcell invasion protein SipB0972
NC_012214:2221702:2238081223808122399821902Erwinia pyrifoliae Ep1/96, complete genomeCell invasion protein SipB7e-1272.8
NC_016832:2829767:2854270285427028560511782Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cell invasion protein sipB0972
NC_011149:2912219:2937640293764029394211782Salmonella enterica subsp. enterica serovar Agona str. SL483,cell invasion protein SipB0972
NC_013961:851044:8761098761098781272019Erwinia amylovora, complete genomeCell invasion protein sipB2e-22108
NC_011205:3050235:3073511307351130752921782Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cell invasion protein SipB0975
NC_011080:2982346:3005618300561830073991782Salmonella enterica subsp. enterica serovar Newport str. SL254,cell invasion protein SipB0972
NC_010102:2967464:2992096299209629938771782Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0975
NC_010067:84093:8409384093858771785Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0902
NC_010660:86445:1065211065211082631743Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIpaB3e-79296
NC_011294:2890500:2913774291377429155551782Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island 1 effector protein0975
NC_011274:2881306:2904578290457829063591782Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island 1 effector protein0974
NC_003198:2856596:2881114288111428828951782Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity island 1 effector protein0972
NC_011147:2814664:2839186283918628409671782Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein0970
NC_016810:3028421:3051690305169030534711782Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 effector protein0975
NC_004631:2842453:2866971286697128687521782Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity island 1 effector protein0972
NC_016831:2867766:2891038289103828928191782Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island 1 effector protein0975
NC_017046:3027161:3050430305043030522111782Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island 1 effector protein0975
NC_006511:2819128:2843650284365028454311782Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity island 1 effector protein0974
NC_015761:2726000:2748713274871327504941782Salmonella bongori NCTC 12419, complete genomepathogenicity island 1 effector protein0926
NC_013722:1689125:1727804172780417294081605Xanthomonas albilineans, complete genomeprobable xsa-invasion protein1e-1791.7
NC_010694:2971170:2987167298716729890531887Erwinia tasmaniensis, complete genomePutative Invasin-like protein (62 kDa antigen)1e-1379
NC_016863:2974333:2997604299760429993851782Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1translocation machinery component0975
NC_003197:3005842:3029114302911430308951782Salmonella typhimurium LT2, complete genometranslocation machinery component0975
NC_016856:3026426:3049351304935130511321782Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranslocation machinery component0975
NC_013971:1660144:1688661168866116905621902Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein5e-1893.2
NC_013971:2876733:2893173289317328951912019Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-22108