Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2957600 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2957600, End: 2957992, Length: 393

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2982346:300019330001933000585393Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion chaparone3e-70263
NC_011094:2913500:293089429308942931286393Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion chaperone9e-70261
NC_011149:2912219:293221529322152932607393Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion chaparone2e-69260
NC_003197:3005842:302368930236893024081393Salmonella typhimurium LT2, complete genomesecretion chaparone2e-69260
NC_010102:2967464:298667129866712987063393Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-69260
NC_011205:3050235:306808630680863068478393Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion chaperone2e-69260
NC_011274:2881306:289915328991532899545393Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91chaperone2e-69260
NC_016810:3028421:304626530462653046657393Salmonella enterica subsp. enterica serovar Typhimurium strchaperone (associated with virulence)2e-69260
NC_016856:3026426:304392630439263044318393Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion chaperone2e-69260
NC_016857:3028421:304626530462653046657393Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion chaperone2e-69260
NC_016860:3029272:304711930471193047511393Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system chaperone2e-69260
NC_016863:2974333:299217929921792992571393Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system chaperone2e-69260
NC_017046:3027161:304500530450053045397393Salmonella enterica subsp. enterica serovar Typhimurium str. 798chaperone (associated with virulence)2e-69260
NC_011294:2890500:290834929083492908741393Salmonella enterica subsp. enterica serovar Enteritidis strchaperone5e-69259
NC_016832:2829767:284885528488552849247393Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-69259
NC_006905:2960260:297721729772172977567351Salmonella enterica subsp. enterica serovar Choleraesuis strchaparone, related to virulence5e-62235
NC_011147:2814664:283377128337712834121351Salmonella enterica subsp. enterica serovar Paratyphi A strchaperone6e-61232
NC_003198:2856596:287569928756992876049351Salmonella enterica subsp. enterica serovar Typhi str. CT18,chaperone (associated with virulence)6e-61232
NC_006511:2819128:283823528382352838585351Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCchaperone (associated with virulence)6e-61232
NC_004631:2842453:286155628615562861906351Salmonella enterica subsp. enterica serovar Typhi Ty2, completechaperone6e-61232
NC_010067:84093:908589085891250393Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-60231
NC_015761:2726000:274323927432392743631393Salmonella bongori NCTC 12419, complete genomevirulence associated chaperone4e-58223
NC_016831:2867766:288567328856732886005333Salmonella enterica subsp. enterica serovar Gallinarum/pullorumchaperone (associated with virulence)1e-47188
NC_009079:705931:708153708153708608456Burkholderia mallei NCTC 10247 chromosome I, complete sequencetype III secretion chaperone BicP8e-0959.3
NC_006349:1630514:164959016495901650045456Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetype III secretion chaperone BicP8e-0959.3
NC_008835:2133696:213591821359182136373456Burkholderia mallei NCTC 10229 chromosome I, complete sequencetype III secretion chaperone BicP8e-0959.3