Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2950253 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2950253, End: 2951431, Length: 1179

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2960260:2969869296986929711041236Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein0810
NC_016857:3028421:3038918303891830401531236Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cell invasion protein0808
NC_003197:3005842:3016342301634230175201179Salmonella typhimurium LT2, complete genomeneedle complex inner membrane protein0806
NC_016810:3028421:3038918303891830400961179Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion apparatus component0806
NC_016856:3026426:3036579303657930377571179Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane protein0806
NC_016863:2974333:2984832298483229860101179Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane protein0806
NC_011274:2881306:2891806289180628929841179Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein0806
NC_011294:2890500:2901001290100129021791179Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein0806
NC_006511:2819128:2830888283088828320661179Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein0803
NC_011094:2913500:2923548292354829247261179Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein PrgH/EprH0803
NC_011147:2814664:2826424282642428276021179Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein0803
NC_003198:2856596:2868356286835628695341179Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein0801
NC_004631:2842453:2854213285421328553911179Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein0801
NC_010067:84093:9697896978981561179Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0776
NC_015761:2726000:2736571273657127377491179Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein0744
NC_011205:3050235:3060733306073330617971065Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein PrgH/EprH0729
NC_016831:2867766:2878265287826528793291065Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein0728
NC_017046:3027161:3037658303765830387221065Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion apparatus component0728
NC_016860:3029272:3039772303977230408361065Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein0728
NC_011080:2982346:2992846299284629939101065Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein PrgH/EprH0727
NC_011083:2980356:2990856299085629919201065Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus protein PrgH/EprH0725
NC_011149:2912219:2924870292487029259341065Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein PrgH/EprH0725
NC_010102:2967464:2979324297932429803881065Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0723
NC_016832:2829767:2841512284151228425761065Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0722
NC_011751:3285646:3304765330476533059551191Escherichia coli UMN026 chromosome, complete genomeputative type III secretion EprH protein2e-50200
CU928160:3030324:3049198304919830503881191Escherichia coli IAI1 chromosome, complete genomePutative Type III secretion EprH protein8e-48191
NC_011748:3196173:3215047321504732162371191Escherichia coli 55989, complete genomePutative Type III secretion EprH protein8e-48191
CU928145:3196173:3215047321504732162371191Escherichia coli 55989 chromosome, complete genomePutative Type III secretion EprH protein8e-48191
NC_011741:3030324:3049198304919830503881191Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion EprH protein8e-48191
NC_009801:3175714:3194586319458631957671182Escherichia coli E24377A, complete genometype III secretion apparatus protein EprH7e-48191
NC_011415:3217796:3236670323667032378511182Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein7e-48191
AP010958:3474077:3492950349295034941311182Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EprH6e-48191
CP002185:3167738:3187993318799331891741182Escherichia coli W, complete genometype III secretion system protein6e-48191
CP002516:903241:9169029169029180831182Escherichia coli KO11, complete genometype III secretion system protein PrgH/EprH6e-48191
NC_013353:3474077:3492950349295034941311182Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EprH6e-48191
NC_013361:3867558:3886432388643238876131182Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein eprH6e-48191
NC_016902:903241:9169029169029180831182Escherichia coli KO11FL chromosome, complete genometype III secretion system protein PrgH/EprH6e-48191
NC_010468:906957:9206229206229218031182Escherichia coli ATCC 8739, complete genometype III secretion system protein PrgH/EprH5e-47188
NC_009800:2995958:3017221301722130184021182Escherichia coli HS, complete genometype III secretion apparatus protein EprH5e-47188
NC_002695:3702344:372054037205403721274735Escherichia coli O157:H7 str. Sakai, complete genomeEprH8e-32138
NC_011353:3805819:382493738249373825671735Escherichia coli O157:H7 str. EC4115 chromosome, complete genome8e-32138
NC_002655:3769643:378786637878663788654789Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-31137
NC_013364:3552284:357116435711643571736573Escherichia coli O111:H- str. 11128, complete genome1e-24114
NC_013971:1660144:1673783167378316750301248Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-20100
NC_013961:1622616:1636255163625516375141260Erwinia amylovora, complete genomeType III secretion system protein PrgH/EprH2e-20100
NC_012214:2221702:2253623225362322549091287Erwinia pyrifoliae Ep1/96, complete genomeType III secretion system protein1e-1997.8
NC_013722:1689125:1712157171215717135601404Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein2e-1893.6
NC_013961:851044:8609638609638622281266Erwinia amylovora, complete genomeType III secretion system protein PrgH/EprH5e-1789
NC_010694:2138000:2166285216628521675771293Erwinia tasmaniensis, complete genomeType III secretion system protein9e-1478.2
NC_013364:3552284:357182635718263572344519Escherichia coli O111:H- str. 11128, complete genome1e-0964.3