Pre_GI: BLASTP Hits

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Query: NC_012125:2938519:2947699 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2947699, End: 2948379, Length: 681

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3027161:303510430351043035784681Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxygen-regulated invasion protein2e-132471
NC_011080:2982346:299029229902922990972681Salmonella enterica subsp. enterica serovar Newport str. SL254,oxygen-regulated invasion protein OrgB2e-132471
NC_011083:2980356:298830229883022988982681Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxygen-regulated invasion protein OrgB2e-132471
NC_006905:2960260:296731529673152967995681Salmonella enterica subsp. enterica serovar Choleraesuis strputative flagellar biosynthesis/type III secretory pathway protein2e-132471
NC_003197:3005842:301378830137883014468681Salmonella typhimurium LT2, complete genomeneedle complex export protein2e-132471
NC_011205:3050235:305817930581793058859681Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxygen-regulated invasion protein OrgB2e-132471
NC_011274:2881306:288925228892522889932681Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein2e-132471
NC_011294:2890500:289844728984472899127681Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein2e-132471
NC_016810:3028421:303636430363643037044681Salmonella enterica subsp. enterica serovar Typhimurium stroxygen-regulated invasion protein2e-132471
NC_016831:2867766:287571128757112876391681Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein2e-132471
NC_016856:3026426:303402530340253034705681Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein2e-132471
NC_016857:3028421:303636430363643037044681Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein2e-132471
NC_016860:3029272:303721830372183037898681Salmonella enterica subsp. enterica serovar Typhimurium stroxygen-regulated invasion protein2e-132471
NC_016863:2974333:298227829822782982958681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein2e-132471
NC_006511:2819128:282834328283432829014672Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCoxygen-regulated invasion protein6e-130462
NC_011149:2912219:292232529223252922996672Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-130462
NC_011094:2913500:292100329210032921674672Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein OrgB6e-130462
NC_011147:2814664:282387928238792824550672Salmonella enterica subsp. enterica serovar Paratyphi A stroxygen-regulated invasion protein6e-130462
NC_016832:2829767:283896728389672839638672Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxygen-regulated invasion protein orgB1e-129461
NC_003198:2856596:286581128658112866482672Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein1e-129461
NC_004631:2842453:285166828516682852339672Salmonella enterica subsp. enterica serovar Typhi Ty2, completeoxygen-regulated invasion protein1e-129461
NC_010067:84093:100026100026100697672Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-128456
NC_015761:2726000:273402627340262734697672Salmonella bongori NCTC 12419, complete genomecell invasion protein3e-124444
NC_010102:2967464:297677029767702977282513Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-99360
NC_011751:3285646:330218333021833302953771Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-0859.3