Pre_GI: BLASTP Hits

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Query: NC_012125:2687980:2705527 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2705527, End: 2706189, Length: 663

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1127983:112798311279831128645663Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-125447
NC_016832:1880174:189888818988881899550663Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-125447
NC_016831:1950650:196819619681961968858663Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-125447
NC_004631:1881214:190203819020381902700663Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-125447
NC_003198:1078113:107811310781131078775663Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-125447
NC_010102:2020762:203829820382982038960663Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-125447
NC_011083:1173802:117380211738021174464663Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-125446
NC_011205:1147556:114755611475561148218663Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-125446
NC_011149:1035990:103863310386331039295663Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-124445
NC_011147:1802535:182376718237671824429663Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-124443
NC_006511:1808815:182858418285841829246663Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-124443
NC_010067:1829041:185464418546441855306663Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-113407
NC_013716:1138441:113844111384411139103663Citrobacter rodentium ICC168, complete genomehypothetical protein2e-104377
NC_014618:2989000:300581930058193006412594Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-55216
NC_017154:1644404:164716216471621647842681Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-33140
NC_014029:1702338:170509617050961705776681Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-33140
NC_010634:1755548:175554817555481756228681Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-33140
NC_008150:844727:847485847485848165681Yersinia pestis Antiqua, complete genomehypothetical protein4e-33140
NC_008149:2802392:284743028474302848110681Yersinia pestis Nepal516, complete genomehypothetical protein4e-33140
NC_003143:1630000:163558016355801636260681Yersinia pestis CO92, complete genomehypothetical protein4e-33140
NC_013421:3093995:311157831115783112102525Pectobacterium wasabiae WPP163, complete genomeProtein of unknown function DUF20571e-23110
NC_010519:275976:278689278689279342654Haemophilus somnus 2336 chromosome, complete genomehypothetical protein5e-21101
NC_011663:3181579:320405132040513204740690Shewanella baltica OS223 chromosome, complete genomehypothetical protein3e-0858.5
NC_008321:2922000:294187629418762942568693Shewanella sp. MR-4, complete genomehypothetical protein2e-0756.2
NC_008322:2983951:300255930025593003251693Shewanella sp. MR-7, complete genomehypothetical protein6e-0754.3
NC_008577:3125675:314239931423993143091693Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein9e-0753.9