Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:2687980:2703309 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2703309, End: 2704520, Length: 1212

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1127325:1127325112732511285361212Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0810
NC_003197:1170746:1170746117074611719571212Salmonella typhimurium LT2, complete genomeputative SAM-dependent methyltransferase0810
NC_011149:1035990:1040302104030210415131212Salmonella enterica subsp. enterica serovar Agona str. SL483,protein YccW0810
NC_010102:2020762:2036080203608020372911212Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0810
NC_011083:1173802:1175471117547111766821212Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein YccW0810
NC_011205:1147556:1149225114922511504361212Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0810
NC_016810:1126693:1127068112706811282791212Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0810
NC_016856:1128715:1129090112909011303011212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative SAM-dependent methyltransferase0810
NC_016857:1126693:1127068112706811282791212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative SAM-dependent methyltransferase0810
NC_016860:1168431:1168431116843111696421212Salmonella enterica subsp. enterica serovar Typhimurium str23S rRNA methyltransferase I0810
NC_016863:1128381:1128381112838111295921212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative SAM-dependent methyltransferase0810
NC_011147:1802535:1821549182154918227601212Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein0808
NC_006511:1808815:1826366182636618275771212Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein0808
NC_011094:1127983:1129652112965211308631212Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0808
NC_004631:1881214:1899820189982019010311212Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0807
NC_003198:1078113:1079782107978210809931212Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0807
NC_016832:1880174:1896670189667018978811212Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Ribosomal RNA large subunit methyltransferase I0807
NC_016831:1950650:1965977196597719671881212Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0806
NC_011294:1048223:1048598104859810498091212Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0806
NC_011274:1057887:1057887105788710590981212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0804
NC_010067:1829041:1852416185241618536271212Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0793
NC_016514:1627664:1627664162766416288541191Enterobacter cloacae EcWSU1 chromosome, complete genomeribosomal RNA large subunit methyltransferase I0730
NC_014618:2989000:3003629300362930048191191Enterobacter cloacae SCF1 chromosome, complete genomerRNA (guanine-N(2)-)-methyltransferase0721
NC_020181:2097066:2123440212344021246421203Enterobacter aerogenes EA1509E, complete genomeLSU m5C1962 methyltransferase RlmI0710
NC_013716:1138441:1140118114011811412211104Citrobacter rodentium ICC168, complete genomehypothetical protein0695
NC_008150:844727:8493848493848505741191Yersinia pestis Antiqua, complete genomehypothetical protein0649
NC_003143:1630000:1637479163747916386691191Yersinia pestis CO92, complete genomehypothetical protein0649
NC_006155:1756000:1757199175719917583891191Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein0649
NC_010634:1755548:1757447175744717586371191Yersinia pseudotuberculosis PB1/+, complete genomePUA domain-containing protein0649
NC_008149:2802392:2845021284502128462111191Yersinia pestis Nepal516, complete genomehypothetical protein0649
NC_014029:1702338:1706995170699517081851191Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0649
NC_017154:1644404:1649062164906216502521191Yersinia pestis D106004 chromosome, complete genomehypothetical protein0649
NC_017160:1628500:1629557162955716307471191Yersinia pestis D182038 chromosome, complete genomehypothetical protein0649
NC_017168:3977767:4020314402031440215041191Yersinia pestis A1122 chromosome, complete genome23S rRNA m(5)C1962 methyltransferase0649
NC_011753:1501868:1525694152569415268871194Vibrio splendidus LGP32 chromosome 1, complete genomeputative SAM-dependent methyltransferase2e-136485
NC_008700:3514745:3529208352920835303981191Shewanella amazonensis SB2B, complete genomeconserved hypothetical SAM-dependent methyltransferase3e-133475
NC_014960:1697818:1722686172268617239001215Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-105383
NC_013959:156991:1569911569911583341344Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function Met101e-98360
NC_009523:1101214:1101214110121411024041191Roseiflexus sp. RS-1 chromosome, complete genomePUA domain-containing protein2e-94346
NC_019970:1457794:1473962147396214751371176Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative SAM-dependent methyltransferase2e-79296
NC_015555:1450704:1461781146178114629561176Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeConserved hypothetical protein CHP000952e-78292
NC_010320:1805818:1822341182234118235881248Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein7e-78291
NC_010321:1361748:1375745137574513769921248Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein7e-78291
NC_014209:1363151:1377566137756613787411176Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function Met106e-78291
NC_015958:1465631:1479829147982914810761248Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein5e-78291
NC_014964:1353939:1368007136800713691821176Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein9e-78290
NC_014538:1125000:1130755113075511319301176Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein9e-78290
NC_013921:1344000:1357809135780913589841176Thermoanaerobacter italicus Ab9 chromosome, complete genomeprotein of unknown function Met102e-77290
NC_014098:1258559:1258559125855912597431185Bacillus tusciae DSM 2912 chromosome, complete genomemethyltransferase small7e-77288
NC_014410:1527405:1538552153855215397271176Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,protein of unknown function Met104e-77288
NC_014622:3819495:3835152383515238365311380Paenibacillus polymyxa SC2 chromosome, complete genomesam-dependent methyltransferase3e-75282
NC_016641:5528826:5547558554755855489371380Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein7e-75281
NC_014483:3498395:3514489351448935158681380Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-74280
NC_016627:1960097:1978112197811219793411230Clostridium clariflavum DSM 19732 chromosome, complete genomeputative SAM-dependent methyltransferase2e-70266
NC_016510:1958453:1959843195984319610091167Flavobacterium columnare ATCC 49512 chromosome, complete genomeputative SAM-dependent methyltransferase2e-64246
NC_008536:2961460:2979567297956729807301164Solibacter usitatus Ellin6076, complete genomePUA domain containing protein9e-63241
NC_015703:5272193:5299782529978253009721191Runella slithyformis DSM 19594 chromosome, complete genomePUA domain-containing protein2e-60233
NC_004556:1933944:1933944193394419351131170Xylella fastidiosa Temecula1, complete genomehypothetical protein3e-60233
NC_016147:151224:1538891538891550581170Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein5e-59228
NC_015977:2966971:2986442298644229876531212Roseburia hominis A2-183 chromosome, complete genomeputative SAM-dependent methyltransferase2e-58226
NC_014632:402500:4162914162914174721182Ilyobacter polytropus DSM 2926 chromosome, complete genomeSAM-dependent methyltransferase2e-58226
NC_015388:2211828:2231593223159322327531161Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein7e-57221
NC_009718:643200:6590316590316602151185Fervidobacterium nodosum Rt17-B1, complete genomePUA domain-containing protein3e-55216
NC_007519:3391090:3412093341209334132831191Desulfovibrio alaskensis G20 chromosome, complete genomeSAM-dependent methyltransferase6e-49195
NC_014122:939190:9449719449719461221152Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function Met103e-48192
NC_000909:1615927:1635791163579116369481158Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein8e-47188
NC_014122:549932:5526875526875538321146Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function Met103e-45182
NC_000909:1615927:1630260163026016314231164Methanocaldococcus jannaschii DSM 2661, complete genomeconserved hypothetical protein)3e-42172
NC_011969:4235818:4255821425582142570201200Bacillus cereus Q1 chromosome, complete genomemethyltransferase5e-38159
NC_011658:4301633:4322713432271343239121200Bacillus cereus AH187 chromosome, complete genomehypothetical protein5e-38159
NC_009785:1414892:1418814141881414199771164Streptococcus gordonii str. Challis substr. CH1, complete genomeMethyltransferase3e-36153
NC_004193:375416:4829814829814841621182Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-36152
NC_017278:1873934:1875991187599118771331143Thermus sp. CCB_US3_UF1 chromosome, complete genomeMethyltransferase4e-36152
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-34147
NC_014829:4565467:4569171456917145703671197Bacillus cellulosilyticus DSM 2522 chromosome, complete genomerRNA (guanine-N(2)-)-methyltransferase3e-33142
NC_015931:71361:1131381131381143161179Pyrolobus fumarii 1A, complete genomehypothetical protein3e-31136
NC_011999:728353:7528647528647540301167Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein4e-30132
NC_017516:917817:939754939754940701948Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein4e-24112
NC_009348:2125698:2125698212569821278572160Aeromonas salmonicida subsp. salmonicida A449, complete genome23S rRNA m(2)G2445 methyltransferase1e-1998.2
NC_007005:2686551:271462227146222715584963Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-1894.4
NC_005773:3253575:327399032739903274952963Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-1790.1
NC_010506:5155951:5162490516249051634971008Shewanella woodyi ATCC 51908, complete genomehypothetical protein4e-1789.4
NC_011294:1006630:1027736102773610298442109Salmonella enterica subsp. enterica serovar Enteritidis str23S rRNA m(2)G2445 methyltransferase4e-1789.4
NC_011205:1107998:1128363112836311304712109Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185323S rRNA m(2)G2445 methyltransferase4e-1789.4
NC_013508:1351447:1367748136774813698652118Edwardsiella tarda EIB202, complete genomeputative RNA methylase3e-1686.7
NC_009257:775538:7943627943627965152154Francisella tularensis subsp. tularensis WY96-3418 chromosome,23S rRNA m(2)G2445 methyltransferase1e-1481.3
NC_016602:1994110:2013620201362020157432124Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceN6-adenine-specific DNA methylase1e-1481.3
NC_016745:2229271:2251955225195522540572103Oceanimonas sp. GK1 chromosome, complete genome23S rRNA m(2)G2445 methyltransferase2e-1480.5
NC_020541:2850831:2869737286973728719232187Rhodanobacter sp. 2APBS1, complete genomeputative N6-adenine-specific DNA methylase4e-1272.8
NC_018604:2303239:231072523107252311597873Brachyspira pilosicoli WesB complete genomeputative SAM dependent methyltransferase1e-1171.2
NC_014330:841841:851391851391852263873Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative SAM dependent methyltransferase1e-1171.2
NC_018607:2184832:219231821923182193190873Brachyspira pilosicoli B2904 chromosome, complete genomeSAM dependent methyltransferase1e-1171.2
NC_009089:4177117:418096041809604181832873Clostridium difficile 630, complete genomehypothetical protein2e-1067.4
NC_013315:3978495:397849539784953979367873Clostridium difficile CD196 chromosome, complete genomehypothetical protein2e-1067.4
NC_017179:3984000:398651539865153987387873Clostridium difficile BI1, complete genomeputative SAM-dependent methyltransferase2e-1067.4
NC_014008:2176633:219252021925202193386867Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeprotein of unknown function methylase putative2e-0860.8
NC_015744:769907:781446781446782270825Chlamydia trachomatis L2c chromosome, complete genomeN6-adenine-specific DNA methylase6e-0858.9
NC_010287:769600:781737781737782564828Chlamydia trachomatis 434/Bu, complete genomeN6-adenine-specific DNA methylase6e-0858.9
NC_010280:769639:781776781776782603828Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeN6-adenine-specific DNA methylase6e-0858.9
NC_017431:451551:463688463688464515828Chlamydia trachomatis E/11023 chromosome, complete genomeN6-adenine-specific DNA methylase8e-0858.5
NC_017439:451535:463672463672464499828Chlamydia trachomatis E/150 chromosome, complete genomeN6-adenine-specific DNA methylase8e-0858.5
NC_014622:2114244:211919721191972119736540Paenibacillus polymyxa SC2 chromosome, complete genomeRNA methyltransferase, rsmd family8e-0858.5
NC_002620:803696:816989816989817816828Chlamydia muridarum Nigg, complete genomehypothetical protein1e-0758.2
NC_014483:1954856:195968719596871960328642Paenibacillus polymyxa E681 chromosome, complete genomeN6-adenine-specific methylase2e-0653.9
NC_019791:570923:591632591632592492861Caldisphaera lagunensis DSM 15908 chromosome, complete genomemethyltransferase3e-0653.5
NC_015185:792933:792933792933793514582Desulfurobacterium thermolithotrophum DSM 11699 chromosome,methyltransferase7e-0652