Pre_GI: BLASTP Hits

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Query: NC_012125:2687980:2699040 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2699040, End: 2699720, Length: 681

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:2020762:203181120318112032491681Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-119426
NC_016863:1128381:113318311331831133863681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1pathogenicity island-encoded protein A2e-118424
NC_016857:1126693:113187011318701132550681Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pathogenicity island-encoded protein A2e-118424
NC_016810:1126693:113187011318701132550681Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-118424
NC_003197:1170746:117554811755481176228681Salmonella typhimurium LT2, complete genomepathogenicity island-encoded protein A2e-118424
NC_006511:1808815:182209818220981822778681Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-117419
NC_011147:1802535:181728118172811817961681Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-117419
NC_011274:1057887:106268710626871063367681Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein5e-117419
NC_011294:1048223:105339810533981054078681Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein5e-117419
NC_004631:1881214:189413018941301894810681Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-116416
NC_003198:1078113:108600310860031086683681Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-116416
NC_011205:1147556:115404511540451154725681Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-115413
NC_011080:1166951:117788411778841178387504Salmonella enterica subsp. enterica serovar Newport str. SL254,pathogenicity island-encoded protein A2e-82304
NC_011083:1173802:118027311802731180776504Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,pathogenicity island-encoded protein A2e-82304
NC_016856:1128715:113389211338921134395504Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Spathogenicity island-encoded protein A2e-82304
NC_016860:1168431:117323311732331173736504Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island-encoded protein A2e-82304
NC_017046:1127325:113212711321271132630504Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island-encoded protein A2e-82304
NC_011149:1035990:104510210451021045605504Salmonella enterica subsp. enterica serovar Agona str. SL483,pathogenicity island-encoded protein A8e-82303
NC_016831:1950650:196188519618851962388504Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein1e-81302
NC_016832:1880174:189115718911571891660504Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-81299
NC_011294:1220526:123464412346441235330687Salmonella enterica subsp. enterica serovar Enteritidis strbacteriophage encoded virulence protein7e-73273
NC_017046:2756000:275753527575352758221687Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage encoded virulence protein6e-72270
NC_011205:1345511:137051413705141370987474Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-55213
NC_016831:1734292:174263117426311743098468Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative bacteriophage encoded virulence protein2e-54212
NC_011094:1127983:113445111344511134732282Salmonella enterica subsp. enterica serovar Schwarzengrund str2e-48192