Pre_GI: BLASTP Hits

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Query: NC_012125:2687980:2694850 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2694850, End: 2695020, Length: 171

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1128381:113788311378831138053171Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-26117
NC_006511:1808815:181790618179061818076171Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-26117
NC_004631:1881214:188993918899391890109171Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-26117
NC_003198:1078113:109070410907041090874171Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-26117
NC_010102:2020762:202762120276212027791171Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-26117
NC_003197:1170746:118024811802481180418171Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-26117
NC_011147:1802535:181308918130891813259171Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-26117
NC_011274:1057887:106738510673851067555171Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-26117
NC_011294:1048223:105809610580961058266171Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-26117
NC_016810:1126693:113657011365701136740171Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-26117
NC_016856:1128715:113859211385921138762171Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-26117
NC_016857:1126693:113657011365701136740171Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-26117
NC_011083:1173802:118500411850041185144141Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-2097.4
NC_011080:1166951:118261411826141182754141Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-2097.4
NC_011149:1035990:105026910502691050409141Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-2097.4
NC_011094:1127983:113894911389491139089141Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-2097.4
NC_011205:1147556:115877511587751158915141Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-2097.4
NC_016831:1950650:195752019575201957660141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-2097.4
NC_016832:1880174:188678918867891886929141Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-2097.4
CU928145:824367:840978840978841211234Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; Qin prophage6e-0959.7
NC_011748:824367:840978840978841211234Escherichia coli 55989, complete genomeconserved hypothetical protein; Qin prophage6e-0959.7
NC_002695:1929215:194697119469711947198228Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0754.7
AC_000091:1627049:163847016384701638703234Escherichia coli W3110 DNA, complete genomehypothetical protein2e-0651.6
CU928160:1668842:167477716747771675010234Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; Qin prophage2e-0651.6
NC_000913:1625500:163478016347801635013234Escherichia coli K12, complete genomeQin prophage; predicted protein2e-0651.6
NC_010473:1712984:172440517244051724638234Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted protein2e-0651.6
NC_011741:1668842:167477716747771675010234Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-0651.6
NC_012759:1517500:152683915268391527072234Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-0651.6
NC_011751:643976:665209665209665442234Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-0651.2
NC_013941:5317424:532898353289835329303321Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-0648.9