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Query: NC_012125:2687980:2694739 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2694739, End: 2694849, Length: 111

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1128381:113805411380541138164111Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1375.1
NC_003197:1170746:118041911804191180529111Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-1375.1
NC_011274:1057887:106755610675561067666111Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1375.1
NC_011294:1048223:105826710582671058377111Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1375.1
NC_016810:1126693:113674111367411136851111Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1375.1
NC_016856:1128715:113876311387631138873111Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-1375.1
NC_016857:1126693:113674111367411136851111Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-1375.1
NC_011147:1802535:181297818129781813088111Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-1373.6
NC_006511:1808815:181779518177951817905111Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-1373.6
NC_003198:1078113:109087510908751090985111Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-1373.6
NC_004631:1881214:188982818898281889938111Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-1373.6