Pre_GI: BLASTP Hits

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Query: NC_012125:2687980:2689560 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2689560, End: 2690072, Length: 513

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1127325:114177511417751142287513Salmonella enterica subsp. enterica serovar Typhimurium str. 7984-hydroxyphenylacetate 3-monooxygenase coupling protein3e-97353
NC_011149:1035990:105518610551861055698513Salmonella enterica subsp. enterica serovar Agona str. SL483,4-hydroxyphenylacetate 3-monooxygenase, reductase component3e-97353
NC_006511:1808815:181261618126161813128513Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4-hydroxyphenylacetate 3-monooxygenase coupling protein3e-97353
NC_010102:2020762:202234220223422022854513Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-97353
NC_003197:1170746:118519611851961185708513Salmonella typhimurium LT2, complete genome4-hydroxyphenylacetate catabolism3e-97353
NC_011094:1127983:114386711438671144379513Salmonella enterica subsp. enterica serovar Schwarzengrund str4-hydroxyphenylacetate 3-monooxygenase, reductase component3e-97353
NC_011147:1802535:180779918077991808311513Salmonella enterica subsp. enterica serovar Paratyphi A str4-hydroxyphenylacetate 3-monooxygenase coupling protein3e-97353
NC_016810:1126693:114151811415181142030513Salmonella enterica subsp. enterica serovar Typhimurium str4-hydroxyphenylacetate 3-monooxygenase coupling protein3e-97353
NC_016856:1128715:114354011435401144052513Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S4-hydroxyphenylacetate catabolism3e-97353
NC_016857:1126693:114151811415181142030513Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/744-hydroxyphenylacetate catabolism3e-97353
NC_016860:1168431:118288111828811183393513Salmonella enterica subsp. enterica serovar Typhimurium str4-hydroxyphenylacetate 3-monooxygenase, reductase component3e-97353
NC_016863:1128381:114283111428311143343513Salmonella enterica subsp. enterica serovar Typhimurium str. UK-14-hydroxyphenylacetate catabolism3e-97353
NC_011083:1173802:118992211899221190434513Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4-hydroxyphenylacetate 3-monooxygenase, reductase component5e-97352
NC_011080:1166951:118753211875321188044513Salmonella enterica subsp. enterica serovar Newport str. SL254,4-hydroxyphenylacetate 3-monooxygenase, reductase component5e-97352
NC_011274:1057887:107233310723331072845513Salmonella enterica subsp. enterica serovar Gallinarum str. 287/914-hydroxyphenylacetate 3-monooxygenase coupling protein5e-97352
NC_011294:1048223:106304410630441063556513Salmonella enterica subsp. enterica serovar Enteritidis str4-hydroxyphenylacetate 3-monooxygenase coupling protein5e-97352
NC_016831:1950650:195223019522301952742513Salmonella enterica subsp. enterica serovar Gallinarum/pullorum4-hydroxyphenylacetate 3-monooxygenase coupling protein5e-97352
NC_011205:1147556:116369311636931164205513Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534-hydroxyphenylacetate 3-monooxygenase, reductase component2e-96350
NC_016832:1880174:188149918814991882011513Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,4-hydroxyphenylacetate 3-monooxygenase reductase component4e-96349
NC_004631:1881214:188464918846491885161513Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4-hydroxyphenylacetate 3-monooxygenase coupling protein4e-96349
NC_010067:1829041:183062118306211831133513Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-96349
NC_003198:1078113:109565210956521096164513Salmonella enterica subsp. enterica serovar Typhi str. CT18,4-hydroxyphenylacetate 3-monooxygenase coupling protein1e-95348
NC_010468:4059436:406215740621574062669513Escherichia coli ATCC 8739, complete genome4-hydroxyphenylacetate 3-monooxygenase, reductase subunit1e-83308
NC_020209:1986503:200980120098012010337537Pseudomonas poae RE*1-1-14, complete genome4-hydroxyphenylacetate 3-monooxygenase, reductase subunit1e-40165
NC_011740:810411:820006820006820506501Escherichia fergusonii ATCC 35469, complete genomeputative flavin:NADH reductase ycdH3e-32137
NC_007384:1086025:110578411057841106242459Shigella sonnei Ss046, complete genomehypothetical protein6e-30129
NC_020209:1949500:197378219737821974279498Pseudomonas poae RE*1-1-14, complete genomeflavin reductase domain-containing protein1e-28125
NC_008061:2153495:217038621703862170967582Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceflavin reductase-like, FMN-binding7e-28123
NC_008543:90312:988069880699387582Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceflavin reductase domain protein, FMN-binding7e-28123
NC_015276:1531159:153439215343921534931540Marinomonas mediterranea MMB-1 chromosome, complete genomeflavin reductase domain protein FMN-binding protein3e-21100
NC_005966:1832066:183418118341811834837657Acinetobacter sp. ADP1, complete genomeputative flavoprotein oxidoreductase1e-1995.9
NC_013956:3641368:365229436522943652773480Pantoea ananatis LMG 20103 chromosome, complete genomeHpaC3e-1890.9
NC_008148:1859888:1884098188409818852791182Rubrobacter xylanophilus DSM 9941, complete genomeflavin reductase-like, FMN-binding protein1e-1685.9
NC_015136:2282488:229253022925302293030501Burkholderia sp. CCGE1001 chromosome 1, complete sequenceflavin reductase domain-containing protein FMN-binding protein8e-1579.7
NC_014640:2693060:269807826980782698650573Achromobacter xylosoxidans A8 chromosome, complete genomeflavin reductase-like domain-containing protein 51e-1479.3
NC_014650:475662:503959503959504471513Geobacillus sp. Y4.1MC1 chromosome, complete genomeflavin reductase1e-1375.9
NC_015733:2658337:268045926804592680989531Pseudomonas putida S16 chromosome, complete genomeputative reductase2e-1272
NC_007509:971500:974685974685975194510Burkholderia sp. 383 chromosome 3, complete sequenceFlavin reductase-like, FMN-binding7e-1270.1
NC_014221:3175013:318213031821303182615486Truepera radiovictrix DSM 17093 chromosome, complete genomeflavin reductase domain protein FMN-binding protein8e-1269.7
NC_016114:3275004:327693932769393277511573Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeflavin reductase domain-containing FMN-binding protein1e-1168.9
NC_009256:2945059:298581929858192986328510Burkholderia vietnamiensis G4 chromosome 1, complete sequenceflavin reductase domain-containing protein2e-1168.2
NC_010623:72500:994169941699934519Burkholderia phymatum STM815 chromosome 2, complete sequenceflavin reductase domain protein FMN-binding4e-1167.4
NC_021171:2019755:203762720376272038121495Bacillus sp. 1NLA3E, complete genomeputative oxidoreductase8e-1166.6
NC_015576:4070195:408430940843094084893585Mycobacterium sp. JDM601 chromosome, complete genomeoxidase1e-1065.9
NC_010501:2511887:251474125147412515226486Pseudomonas putida W619, complete genomeflavin reductase domain protein FMN-binding1e-1065.9
NC_008268:5745620:575082157508215751447627Rhodococcus sp. RHA1, complete genomepossible monooxygenase1e-1065.5
NC_009439:3770282:379781737978173798302486Pseudomonas mendocina ymp, complete genomeflavin reductase domain-containing protein2e-1065.1
NC_015312:3290887:330234933023493302888540Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeflavin reductase domain-containing protein FMN-binding protein3e-1064.7
NC_006142:140853:180003180003180488486Rickettsia typhi str. Wilmington, complete genomehypothetical protein6e-1063.5
NC_017062:141270:180420180420180905486Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein6e-1063.5
NC_017066:140853:180003180003180488486Rickettsia typhi str. TH1527 chromosome, complete genomehypothetical protein6e-1063.5
NC_016906:2871272:289105928910592891550492Gordonia polyisoprenivorans VH2 chromosome, complete genomenitrilotriacetate monooxygenase component B5e-1063.5
NC_013209:2384826:239166823916682392144477Acetobacter pasteurianus IFO 3283-01, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017100:2383487:239287523928752393351477Acetobacter pasteurianus IFO 3283-03, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017108:2383370:239021223902122390688477Acetobacter pasteurianus IFO 3283-12, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017111:2383388:239023023902302390706477Acetobacter pasteurianus IFO 3283-32, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017121:2383375:239021723902172390693477Acetobacter pasteurianus IFO 3283-07, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017125:2383467:239285523928552393331477Acetobacter pasteurianus IFO 3283-22, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017146:2383509:239289723928972393373477Acetobacter pasteurianus IFO 3283-26, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_017150:2290681:229941422994142299890477Acetobacter pasteurianus IFO 3283-01-42C, complete genomeflavin mononucleotide (FMN) reductase8e-1063.2
NC_013929:1611940:164866016486601649157498Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-1062.8
NC_012856:798922:806916806916807494579Ralstonia pickettii 12D chromosome 1, complete genomeflavin reductase domain protein FMN-binding1e-0962.4
NC_012560:3303961:331106733110673312008942Azotobacter vinelandii DJ, complete genomeFlavin reductase domain protein7e-0960.1
NC_021150:3303959:331106533110653312006942Azotobacter vinelandii CA6, complete genomeFlavin reductase domain protein7e-0960.1
NC_018581:3646489:366549536654953666019525Gordonia sp. KTR9 chromosome, complete genomeflavin reductase domain protein / FMN-binding protein2e-0858.9
NC_007794:1504449:150393415039341504452519Novosphingobium aromaticivorans DSM 12444, complete genomeflavin reductase-like, FMN-binding2e-0858.5
NC_012982:2730000:273151327315132732001489Hirschia baltica ATCC 49814, complete genomeflavin reductase domain protein FMN-binding4e-0857.8
NC_015723:961909:961355961355961912558Cupriavidus necator N-1 chromosome 2, complete sequencenitrilotriacetate monooxygenase component B3e-0857.8
NC_015723:2550000:255734525573452557869525Cupriavidus necator N-1 chromosome 2, complete sequencenitrilotriacetate monooxygenase component B3e-0857.8
NC_007434:2449721:247392124739212474877957Burkholderia pseudomallei 1710b chromosome I, complete sequencenitrilotriacetate monooxygenase3e-0857.8
NC_015593:2696000:270830527083052708823519Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeflavin reductase domain-containing protein4e-0857.4
NC_014815:2055286:205733820573382057901564Micromonospora sp. L5 chromosome, complete genomeflavin reductase domain protein fmn-binding protein4e-0857.4
NC_014391:1812500:181271118127111813274564Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeflavin reductase domain-containing protein4e-0857.4
NC_016943:1356419:137279813727981373319522Blastococcus saxobsidens DD2, complete genomeputative oxidoreductase5e-0857
NC_013510:517878:537799537799538311513Thermomonospora curvata DSM 43183, complete genomeflavin reductase domain protein FMN-binding protein5e-0857
NC_015312:2278566:231631823163182316830513Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeflavin reductase domain-containing protein FMN-binding protein9e-0856.2
NC_007778:5079500:509427450942745094762489Rhodopseudomonas palustris HaA2, complete genomeFlavin reductase-like, FMN-binding3e-0754.7
NC_015594:160848:172202172202172693492Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeflavin reductase domain-containing protein3e-0754.7
NC_008268:442657:457084457084457620537Rhodococcus sp. RHA1, complete genomeprobable nitrilotriacetate monooxygenase component B4e-0754.3
NC_009937:4768500:477049447704944770994501Azorhizobium caulinodans ORS 571, complete genomeputative FMN-binding flavin reductase3e-0754.3
NC_007298:1418500:146154814615481462072525Dechloromonas aromatica RCB, complete genomeFlavin reductase-like, FMN-binding3e-0754.3
NC_009480:739395:752338752338752832495Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative flavin-dependant reductase8e-0753.1
NC_009338:2042664:204433420443342044837504Mycobacterium gilvum PYR-GCK chromosome, complete genomeflavin reductase domain-containing protein9e-0753.1
NC_020302:85821:139148139148139744597Corynebacterium halotolerans YIM 70093 = DSM 44683, completeflavin reductase-like domain-containing protein2e-0652
NC_014831:2133060:214575021457502146241492Thermaerobacter marianensis DSM 12885 chromosome, complete genomeflavin reductase domain protein FMN-binding protein3e-0651.2
NC_011729:1600056:1605973160597316076941722Cyanothece sp. PCC 7424 chromosome, complete genomeflavin reductase FMN-binding domain-containing protein3e-0651.2
NC_014830:3438504:3488772348877234900221251Intrasporangium calvum DSM 43043 chromosome, complete genomeflavin reductase domain protein FMN-binding protein5e-0650.4
NC_015589:2878000:289587528958752896522648Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflavin reductase domain-containing protein6e-0650.1