Pre_GI: BLASTP Hits

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Query: NC_012125:2646792:2668131 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2668131, End: 2668769, Length: 639

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-121434
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator2e-120431
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator2e-120431
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway2e-102370
NC_007384:1086025:111171911117191112357639Shigella sonnei Ss046, complete genomeputative tet operon regulator1e-101369
NC_020063:2785652:279097727909772791615639Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator3e-98357
NC_009436:1679265:169231516923151692953639Enterobacter sp. 638, complete genomeTetR family transcriptional regulator3e-95347
NC_016816:2953530:298857429885742989209636Pantoea ananatis LMG 5342, complete genomeHTH-type transcriptional regulator RutR2e-80298
NC_008800:2127918:213056121305612131229669Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,TetR family transcriptional regulator6e-74276
NC_015224:2061951:206528820652882065869582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,TetR family transcriptional regulator3e-67254
NC_015556:819503:819503819503820162660Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, TetR family4e-37154
NC_015376:2241000:224550722455072246205699Burkholderia gladioli BSR3 chromosome chromosome 2, completeTetR family transcriptional regulator3e-34144
NC_015563:4383000:440362344036234404303681Delftia sp. Cs1-4 chromosome, complete genomeTetracycline transcriptional regulator YcdC domain-containing protein1e-28126
NC_013209:2337204:236647023664702367123654Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR4e-27121
NC_017100:2339826:236909223690922369745654Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator TetR4e-27121
NC_017108:2337163:236642923664292367082654Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator TetR4e-27121
NC_017111:2337181:236644723664472367100654Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator TetR4e-27121
NC_017121:2337168:236643423664342367087654Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator TetR4e-27121
NC_017125:2339806:236907223690722369725654Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator TetR4e-27121
NC_017146:2339848:236911423691142369767654Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator TetR4e-27121
NC_017150:2244950:227421622742162274869654Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator TetR4e-27121
NC_008228:4696338:470983347098334710468636Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, TetR family5e-1271.2
NC_014837:2758239:275953327595332760171639Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein5e-0857.8
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family6e-0857.4
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein7e-0857.4
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-0757
NC_010552:2331486:234899723489972349671675Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family1e-0756.6
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein1e-0756.2
NC_015422:3366500:336988733698873370549663Alicycliphilus denitrificans K601 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_016002:2453919:247043024704302471047618Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator3e-0755.1
NC_021184:2936244:295949929594992960146648Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator3e-0755.1
NC_010511:7024412:702935870293587030014657Methylobacterium sp. 4-46 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_017904:2724941:274766527476652748234570Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_010515:2037825:203968620396862040360675Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family6e-0754.3
NC_000911:2747604:276317027631702763733564Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0754.3
NC_017039:2745432:276099827609982761561564Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein5e-0754.3
NC_017052:2745420:276098627609862761549564Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein5e-0754.3
NC_017277:2746421:276198727619872762550564Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0754.3
NC_014228:1336466:133646613364661337143678Xenorhabdus nematophila ATCC 19061, complete genomeputative transcriptional repressor with homeodomain-like DNA binding domain (TetR/AcrR family)7e-0753.9
NC_011296:1542835:154922215492221549848627Thermodesulfovibrio yellowstonii DSM 11347, complete genometranscriptional regulator, TetR family9e-0753.5
NC_015593:2696000:269923826992382699945708Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeregulatory protein TetR1e-0653.1
NC_015224:1641819:164285416428541643564711Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding transcriptional regulator1e-0653.1
NC_008268:5745620:575548057554805756157678Rhodococcus sp. RHA1, complete genometranscriptional regulator, TetR family2e-0652.8
NC_016641:1369424:137716413771641377715552Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family2e-0652.8
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family2e-0652.8
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator1e-0652.8
NC_014824:263491:278808278808279428621Ruminococcus albus 7 plasmid pRUMAL01, complete sequencetranscriptional regulator, TetR family2e-0652.4
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator3e-0652
NC_011894:6888562:689151368915136892166654Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family4e-0651.6
NC_009633:168266:220777220777221364588Alkaliphilus metalliredigens QYMF chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_011001:63986:830078300783588582Burkholderia cenocepacia J2315 chromosome 2, complete sequenceTetR family regulatory protein4e-0651.6
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family3e-0651.6
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_012792:627500:631815631815632462648Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, TetR family8e-0650.4
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family1e-0550.1