Pre_GI: BLASTP Hits

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Query: NC_012125:2646792:2661788 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2661788, End: 2663278, Length: 1491

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1164176:1168560116856011700681509Salmonella enterica subsp. enterica serovar Typhimurium str. 798sodium/proline symporter (proline permease)0899
NC_016857:1163919:1168300116830011698111512Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74major sodium/proline symporter0899
NC_006511:1770000:1784835178483517863431509Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsodium/proline symporter (proline permease)0899
NC_011147:1763681:1780018178001817815261509Salmonella enterica subsp. enterica serovar Paratyphi A strsodium/proline symporter0899
NC_011083:1216500:1216709121670912182171509Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sodium/proline symporter0899
NC_003197:1207597:1211980121198012134881509Salmonella typhimurium LT2, complete genomemajor sodium/proline symporter0899
NC_011080:1209935:1214319121431912158271509Salmonella enterica subsp. enterica serovar Newport str. SL254,sodium/proline symporter0899
NC_011094:1166271:1170655117065511721631509Salmonella enterica subsp. enterica serovar Schwarzengrund strsodium/proline symporter0899
NC_011205:1186097:1190480119048011919881509Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sodium/proline symporter0899
NC_011274:1094379:1098763109876311002711509Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sodium/proline symporter0899
NC_011294:1085447:1089849108984910913571509Salmonella enterica subsp. enterica serovar Enteritidis strsodium/proline symporter0899
NC_016810:1163919:1168303116830311698111509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter (proline permease)0899
NC_016856:1165941:1170325117032511718331509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smajor sodium/proline symporter0899
NC_016860:1205282:1209666120966612111741509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter0899
NC_016863:1165232:1169616116961611711241509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1major sodium/proline symporter0899
NC_010102:1979742:1994562199456219960521491Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0898
NC_003198:1117687:1122071112207111235791509Salmonella enterica subsp. enterica serovar Typhi str. CT18,sodium/proline symporter (proline permease)0897
NC_004631:1842050:1857234185723418587421509Salmonella enterica subsp. enterica serovar Typhi Ty2, completesodium/proline symporter0897
NC_006905:1186895:1191279119127911927871509Salmonella enterica subsp. enterica serovar Choleraesuis strSSS family, major sodium/proline symporter0897
NC_011149:1077589:1081970108197010834811512Salmonella enterica subsp. enterica serovar Agona str. SL483,sodium/proline symporter0896
NC_016832:1838220:1854084185408418555741491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sodium/proline symporter0896
NC_013716:1178383:1178383117838311798911509Citrobacter rodentium ICC168, complete genomesodium/proline symporter (proline permease)0859
NC_020211:3151458:3169357316935731708411485Serratia marcescens WW4, complete genomeproline:sodium symporter0739
NC_014029:2388500:2409373240937324108571485Yersinia pestis Z176003 chromosome, complete genomeproline permease0724
NC_010465:2582080:2601729260172926032131485Yersinia pseudotuberculosis YPIII, complete genomesodium/proline symporter0724
NC_009348:3819271:3834772383477238362921521Aeromonas salmonicida subsp. salmonicida A449, complete genomesodium/proline symporter0711
NC_008570:4009762:4022787402278740243041518Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesodium/proline symporter0709
NC_015563:733704:7345307345307360321503Delftia sp. Cs1-4 chromosome, complete genomesodium/proline symporter8e-161567
NC_013416:820989:8209898209898225091521Aggregatibacter actinomycetemcomitans D11S-1, complete genomesodium/proline symporter3e-154545
NC_016513:1126263:1126263112626311277831521Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completesodium/proline symporter2e-153542
NC_006322:717953:7333407333407348211482Bacillus licheniformis ATCC 14580, complete genomeOpuE3e-121435
NC_006270:718169:7335577335577350381482Bacillus licheniformis ATCC 14580, complete genomeproline transporter3e-121435
NC_015634:2694706:2714055271405527155331479Bacillus coagulans 2-6 chromosome, complete genomesodium/proline symporter7e-118424
NC_012973:49208:5035350353518431491Helicobacter pylori B38 chromosome, complete genomeSymporter, SSS family (Proline Permease); membrane protein1e-117423
NC_016023:1769925:1772438177243817739161479Bacillus coagulans 36D1 chromosome, complete genomesodium/proline symporter5e-117421
NC_000915:53715:5622456224577141491Helicobacter pylori 26695, complete genomeproline permease (putP)3e-114412
NC_018939:53715:5622456224577141491Helicobacter pylori 26695 chromosome, complete genomesodium/proline symporter3e-114412
NC_013960:2761353:2776451277645127779711521Nitrosococcus halophilus Nc4 chromosome, complete genomesodium/proline symporter1e-113410
NC_014560:53750:5626056260577501491Helicobacter pylori SJM180 chromosome, complete genomesodium/proline symporter1e-113410
NC_014555:47372:4829248292497911500Helicobacter pylori PeCan4 chromosome, complete genomeproline permease (putP)2e-113409
NC_016800:979494:99942799942710009921566Corynebacterium diphtheriae BH8 chromosome, complete genomesodium/proline symporter5e-109395
NC_015873:2294312:2296948229694822984591512Megasphaera elsdenii DSM 20460, complete genomesodium/proline symporter3e-108392
NC_016932:832748:8519888519888535591572Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSodium/proline symporter2e-107389
NC_017347:2017097:2022381202238120239191539Staphylococcus aureus subsp. aureus T0131 chromosome, completeSodium/proline symporter3e-107389
NC_020302:1241504:1271256127125612728391584Corynebacterium halotolerans YIM 70093 = DSM 44683, completesodium/proline symporter3e-106385
NC_012039:412837:4322264322264337041479Campylobacter lari RM2100, complete genomesodium/proline symporter1e-104380
NC_010336:564958:5707355707355722011467Francisella philomiragia subsp. philomiragia ATCC 25017, completeproline:Na+ symporter2e-102373
NC_013947:373862:3928273928273943681542Stackebrandtia nassauensis DSM 44728 chromosome, complete genomesodium/proline symporter2e-100367
NC_013410:2586500:2603598260359826051391542Fibrobacter succinogenes subsp. succinogenes S85 chromosome,sodium/proline symporter2e-100366
NC_017305:863072:8638258638258652671443Corynebacterium pseudotuberculosis PAT10 chromosome, completeSodium/proline symporter5e-100365
NC_017303:863060:8638138638138652551443Corynebacterium pseudotuberculosis I19 chromosome, complete genomeSodium/proline symporter5e-100365
NC_017301:863500:8636208636208650621443Corynebacterium pseudotuberculosis C231 chromosome, completeSodium/proline symporter5e-100365
NC_017031:863093:8638468638468652881443Corynebacterium pseudotuberculosis P54B96 chromosome, completeSodium/proline symporter5e-100365
NC_014329:844622:8640028640028654321431Corynebacterium pseudotuberculosis FRC41 chromosome, completesodium/proline symporter family protein2e-99363
NC_016781:844613:8639938639938654351443Corynebacterium pseudotuberculosis 3/99-5 chromosome, completesodium/proline symporter1e-99363
NC_017300:863898:8638988638988653401443Corynebacterium pseudotuberculosis 1002 chromosome, completeSodium/proline symporter1e-99363
NC_015696:285456:3188743188743202171344Francisella sp. TX077308 chromosome, complete genomeProline/sodium symporter PutP / Propionate/sodium symporter3e-92339
NC_009665:5072413:5110550511055051120461497Shewanella baltica OS185 chromosome, complete genomesodium/proline symporter2e-86320
NC_011663:5016488:5036749503674950382451497Shewanella baltica OS223 chromosome, complete genomesodium/proline symporter2e-86320
NC_016901:5130147:5167084516708451685801497Shewanella baltica OS678 chromosome, complete genomesodium/proline symporter2e-86320
NC_009997:5188221:5226462522646252279581497Shewanella baltica OS195, complete genomesodium/proline symporter2e-86320
NC_008618:10915:3405034050356451596Bifidobacterium adolescentis ATCC 15703, complete genomepossible sodium_proline symporter2e-76286
NC_015067:32500:5513155131567711641Bifidobacterium longum subsp. longum JCM 1217, complete genomesodium/proline symporter3e-76286
NC_013743:505842:5199445199445216321689Haloterrigena turkmenica DSM 5511, complete genomeSSS sodium solute transporter superfamily2e-50200
NC_008260:2442000:2446986244698624483831398Alcanivorax borkumensis SK2, complete genomesodium solute transporter family protein8e-38158
NC_015500:1236874:1258003125800312594601458Treponema brennaborense DSM 12168 chromosome, complete genomeSSS sodium solute transporter superfamily6e-32139
NC_019962:1750497:1812337181233718139471611Natrinema pellirubrum DSM 15624, complete genomeSSS sodium solute transporter1e-29131
NC_014002:1129349:1139926113992611415241599Methanohalophilus mahii DSM 5219 chromosome, complete genomeSSS sodium solute transporter superfamily4e-29129
NC_015216:652266:6522666522666538491584Methanobacterium sp. AL-21 chromosome, complete genomesodium solute transporter superfamily protein1e-27124
NC_004193:375416:5351285351285365641437Oceanobacillus iheyensis HTE831, complete genomesodium/panthothenate symporter5e-27122
NC_009328:293000:3261563261563276251470Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesodium/panthothenate symporter1e-26121
NC_009634:1002295:1017788101778810193891602Methanococcus vannielii SB chromosome, complete genomeSSS family solute/sodium (Na+) symporter5e-26119
NC_005791:1626448:1640720164072016423211602Methanococcus maripaludis S2, complete genomeNa+/solute symporter4e-25116
NC_015847:1712023:1726278172627817278791602Methanococcus maripaludis XI chromosome, complete genomeSSS sodium solute transporter superfamily protein4e-25116
NC_009637:920423:9352379352379368381602Methanococcus maripaludis C7 chromosome, complete genomeSSS family solute/sodium (Na+) symporter6e-25115
NC_009975:917337:9201059201059217061602Methanococcus maripaludis C6, complete genomeSSS sodium solute transporter superfamily1e-24115
NC_009135:1654131:1657350165735016589511602Methanococcus maripaludis C5, complete genomeSSS sodium solute transporter superfamily1e-24115
NC_013204:74855:8997789977915151539Eggerthella lenta DSM 2243, complete genomeNa+/solute symporter2e-22107
NC_005945:1523014:1547956154795615495061551Bacillus anthracis str. Sterne, complete genomesodium/solute symporter family protein1e-22107
NC_007530:1523060:1548002154800215495521551Bacillus anthracis str. 'Ames Ancestor', complete genomesodium/solute symporter family protein1e-22107
NC_003997:1522937:1547879154787915494291551Bacillus anthracis str. Ames, complete genomesodium/solute symporter family protein1e-22107
NC_011773:1590560:1615511161551116170611551Bacillus cereus AH820 chromosome, complete genomesodium/solute symporter family protein1e-22107
NC_012659:1522960:1547902154790215494521551Bacillus anthracis str. A0248, complete genomesodium/solute symporter family protein1e-22107
NC_005957:1549201:1574152157415215757021551Bacillus thuringiensis serovar konkukian str. 97-27, completesodium/solute symporter family protein; possible sodium/proline symporter3e-22106
NC_015578:2026741:2070559207055920720221464Treponema primitia ZAS-2 chromosome, complete genomeSSS sodium solute transporter superfamily9e-22105
NC_011094:4361238:4402069440206944037181650Salmonella enterica subsp. enterica serovar Schwarzengrund stracetate permease4e-1996.7
NC_013716:1618249:1623296162329616247831488Citrobacter rodentium ICC168, complete genomeputative sodium/pantothenate symporter (pantothenate permease)1e-1894.7
NC_015437:767572:7675727675727690531482Selenomonas sputigena ATCC 35185 chromosome, complete genomesodium/pantothenate symporter7e-1789
NC_012881:2878000:2896672289667228981441473Desulfovibrio salexigens DSM 2638, complete genomesodium/pantothenate symporter2e-1687.8
NC_008463:1912348:1945934194593419475891656Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/proline:solute symporter7e-1685.9
NC_020181:3585898:3590081359008135917301650Enterobacter aerogenes EA1509E, complete genomeAcetate permease ActP (cation/acetate symporter)3e-1584
NC_016612:1790256:1801501180150118031501650Klebsiella oxytoca KCTC 1686 chromosome, complete genomeacetate permease3e-1583.6
NC_008570:2216736:2260336226033622619911656Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecation/acetate symporter ActP3e-1583.6
NC_007510:1959883:1985076198507619867101635Burkholderia sp. 383 chromosome 1, complete sequenceNa+/solute symporter3e-1583.6
NC_014335:3288500:3305853330585333072921440Bacillus cereus biovar anthracis str. CI chromosome, completesodium/pantothenate symporter9e-1582
NC_015573:2900906:2918572291857229200171446Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeNa+/solute symporter1e-1482
NC_014914:1327245:1349441134944113509221482Taylorella equigenitalis MCE9 chromosome, complete genomePantothenate:Na+ symporter1e-1481.3
NC_009328:2808897:2816760281676028182231464Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSodium/pantothenate symporter3e-1480.1
NC_015666:1849618:1854791185479118564821692Halopiger xanaduensis SH-6 chromosome, complete genomeputative sodium symporter protein5e-1376.3
NC_007510:3340008:3372079337207933737731695Burkholderia sp. 383 chromosome 1, complete sequenceacetate permease2e-1274.3
NC_009831:2045811:2055213205521320566641452Shewanella sediminis HAW-EB3, complete genomeputative sodium/pantothenate symporter4e-1273.6
NC_019908:2247956:2262469226246922639021434Brachyspira pilosicoli P43/6/78 chromosome, complete genomesodium:solute symport protein6e-1272.8
NC_014330:952500:9535709535709550031434Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative sodium:solute symport protein7e-1272.4
NC_013517:1916020:1932426193242619338771452Sebaldella termitidis ATCC 33386, complete genomeNa+/solute symporter2e-1171.2
NC_013202:1144192:1163556116355611652441689Halomicrobium mukohataei DSM 12286, complete genomeNa+/solute symporter2e-1068.2
NC_008463:3168837:3196396319639631980541659Pseudomonas aeruginosa UCBPP-PA14, complete genomePredicted symporter3e-1067
NC_016786:720000:7204347204347220861653Corynebacterium diphtheriae HC01 chromosome, complete genomemonocarboxylic acid transporter7e-1065.9
NC_016782:720000:7204657204657221171653Corynebacterium diphtheriae 241 chromosome, complete genomemonocarboxylic acid transporter7e-1065.9
NC_013446:2623528:2628373262837326299411569Comamonas testosteroni CNB-2, complete genomeSSS sodium solute transporter1e-0965.1
NC_013037:6281164:6335000633500063365711572Dyadobacter fermentans DSM 18053, complete genomeSSS sodium solute transporter superfamily1e-0964.7
NC_016787:733685:7340307340307356821653Corynebacterium diphtheriae HC03 chromosome, complete genomemonocarboxylic acid transporter3e-0963.5
NC_008314:1465643:1482677148267714842481572Ralstonia eutropha H16 chromosome 2, complete sequenceAPC transporter, SSS family3e-0963.5
NC_011753:3088952:3088952308895230906551704Vibrio splendidus LGP32 chromosome 1, complete genomesodium/solute symporter4e-0963.5
NC_015320:1342105:1360580136058013619561377Archaeoglobus veneficus SNP6 chromosome, complete genomeNa+/solute symporter5e-0963.2
NC_013799:1:5168516865471380Hydrogenobacter thermophilus TK-6, complete genomesodium/solute symporter8e-0962.4
NC_017161:1:5229522966081380Hydrogenobacter thermophilus TK-6 chromosome, complete genomeNa+/solute symporter9e-0962.4
NC_016830:1719407:1744209174420917455971389Pseudomonas fluorescens F113 chromosome, complete genomesodium-solute symporter2e-0861.2
NC_011312:3060371:3062162306216230638651704Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completesodium/solute symporter2e-0860.8
NC_007963:1190847:1207503120750312092451743Chromohalobacter salexigens DSM 3043, complete genomeNa+/solute symporter3e-0860.5
NC_015737:664999:6649996649996665941596Clostridium sp. SY8519, complete genomeNa+/proline, Na+/panthothenate symporter3e-0860.5
NC_007298:1759881:1760556176055617625922037Dechloromonas aromatica RCB, complete genomeNa+/solute symporter3e-0860.5
NC_010475:1161000:1175428117542811769691542Synechococcus sp. PCC 7002, complete genomesodium-coupled permease5e-0859.7
NC_015673:397947:4115874115874132031617Corynebacterium resistens DSM 45100 chromosome, complete genomemonocarboxylic acid transporter5e-0859.7
NC_016148:1877711:1908140190814019098581719Thermovirga lienii DSM 17291 chromosome, complete genomeNa+/solute symporter6e-0859.3
NC_016602:2292518:2309916230991623114361521Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceNa+/proline symporter8e-0858.9
NC_014008:2176633:2194433219443321962651833Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeputative sodium symporter protein1e-0758.5
NC_009512:1518113:1554501155450115558801380Pseudomonas putida F1, complete genomeNa+/solute symporter2e-0757.4
NC_016616:2112211:2114845211484521168872043Dechlorosoma suillum PS chromosome, complete genomeputative sodium:solute symporter, VC_2705 subfamily2e-0757.4
NC_014206:1694330:1694330169433016957541425Geobacillus sp. C56-T3 chromosome, complete genomeNa+/solute symporter3e-0757
NC_007677:3505487:3509872350987235114131542Salinibacter ruber DSM 13855, complete genomeNa+/solute symporter3e-0757
NC_013159:1225866:1246297124629712478951599Saccharomonospora viridis DSM 43017, complete genomeSSS sodium solute transporter3e-0757
NC_014915:1909275:1947007194700719484251419Geobacillus sp. Y412MC52 chromosome, complete genomeNa+/solute symporter3e-0757
NC_013411:2767400:2807071280707128084891419Geobacillus sp. Y412MC61, complete genomeNa+/solute symporter3e-0757
NC_014032:3573920:3577714357771435792551542Salinibacter ruber M8 chromosome, complete genomeNa+/solute symporter3e-0757
NC_003295:2111730:2127208212720821292742067Ralstonia solanacearum GMI1000, complete genomePROBABLE SOLUTE:NA+ SYMPORTER PERMEASE TRANSMEMBRANE PROTEIN6e-0755.8
NC_014311:1507945:1509949150994915120152067Ralstonia solanacearum PSI07 chromosome, complete genomeNa+/solute symporter7e-0755.8
NC_015565:530000:5444885444885461161629Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeSSS sodium solute transporter superfamily8e-0755.8
NC_015320:273979:2871712871712888261656Archaeoglobus veneficus SNP6 chromosome, complete genomeputative sodium symporter protein1e-0655.5
NC_008148:583030:6040206040206054591440Rubrobacter xylanophilus DSM 9941, complete genomeNa+/solute symporter9e-0755.5
NC_015425:2072703:2078929207892920805271599Clostridium botulinum BKT015925 chromosome, complete genomesodium:solute symporter family protein9e-0755.5
NC_007963:2644930:2673281267328126747261446Chromohalobacter salexigens DSM 3043, complete genomeNa+/solute symporter1e-0654.7
NC_014963:5034904:5048815504881550505361722Terriglobus saanensis SP1PR4 chromosome, complete genomeSSS sodium solute transporter superfamily protein2e-0654.7
NC_004337:3590323:3892662389266238943771716Shigella flexneri 2a str. 301, complete genomeputative cotransporter2e-0654.3
NC_009767:433432:4334324334324357112280Roseiflexus castenholzii DSM 13941, complete genomeNa+/solute symporter4e-0653.5
NC_016885:1217517:1227394122739412291421749Pyrobaculum oguniense TE7 chromosome, complete genomeputative sodium:solute symporter, VC_2705 subfamily5e-0653.1
NC_010067:3753971:3773520377352037752351716Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0652