Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:2646792:2657338 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2657338, End: 2658834, Length: 1497

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1905289:1920353192035319218491497Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative sodium/glucose cotransporter0867
NC_016856:1165941:1174786117478611762821497Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative sodium/glucose cotransporter0865
NC_016810:1163919:1172764117276411742601497Salmonella enterica subsp. enterica serovar Typhimurium strputative sodium/glucose cotransporter0865
NC_011274:1094379:1103225110322511047211497Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sodium/glucose cotransporter0865
NC_003197:1207597:1216441121644112179371497Salmonella typhimurium LT2, complete genomeputative sodium/glucose cotransporter0865
NC_010067:1782998:1794454179445417959501497Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0860
NC_012779:996879:9968799968799983601482Edwardsiella ictaluri 93-146, complete genomeN-acetylneuraminate transporter, sodium-glucose/galactose cotransporter0749
NC_020418:1397112:1411799141179914132891491Morganella morganii subsp. morganii KT, complete genomePutative sialic acid transporter0737
NC_017046:1164176:1173021117302111743251305Salmonella enterica subsp. enterica serovar Typhimurium str. 798sodium/glucose cotransporter0734
NC_016857:1163919:1172764117276411742601497Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative sodium/glucose cotransporter0865
NC_016860:1205282:1214127121412712156231497Salmonella enterica subsp. enterica serovar Typhimurium strputative sodium/glucose cotransporter0865
NC_016863:1165232:1174077117407711755731497Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative sodium/glucose cotransporter0865
NC_011294:1085447:1094311109431110958071497Salmonella enterica subsp. enterica serovar Enteritidis strsodium/glucose cotransporter0867
NC_011205:1186097:1194942119494211964381497Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sodium-glucose/galactose cotransporter0867
NC_011147:1763681:1775569177556917770651497Salmonella enterica subsp. enterica serovar Paratyphi A strsodium/glucose cotransporter0867
NC_011083:1216500:1221171122117112226671497Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sodium-glucose/galactose cotransporter0867
NC_011080:1209935:1218781121878112202771497Salmonella enterica subsp. enterica serovar Newport str. SL254,sodium-glucose/galactose cotransporter0867
NC_006511:1770000:1780386178038617818821497Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative sodium/glucose cotransporter0867
NC_010102:1979742:1990112199011219916081497Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0867
NC_011094:1166271:1175116117511611766121497Salmonella enterica subsp. enterica serovar Schwarzengrund strsodium-glucose/galactose cotransporter0866
NC_016832:1838220:185027318502731851130858Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,N-acetylneuraminate transporter, sodium-glucose/galactose cotransporter4e-122438
NC_003198:1117687:112653311265331127390858Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative membrane transporter4e-122438
NC_004631:1842050:185342318534231854280858Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative membrane transporter4e-122438
NC_012984:3077004:3077004307700430785121509Lactobacillus plantarum JDM1, complete genometransport protein6e-100365
NC_004631:1842050:185278318527831853310528Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative membrane transporter3e-95349
NC_003198:1117687:112750311275031128030528Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative membrane transporter3e-95349
NC_016832:1838220:184963318496331850160528Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,N-acetylneuraminate transporter, sodium-glucose/galactose cotransporter3e-95349
NC_012590:637651:6631006631006646321533Corynebacterium aurimucosum ATCC 700975, complete genomeNa+/proline symporter4e-92338
NC_010475:1161000:1175428117542811769691542Synechococcus sp. PCC 7002, complete genomesodium-coupled permease3e-41170
NC_015497:2831148:2848202284820228498151614Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeSSS sodium solute transporter superfamily1e-31137
NC_015064:2421034:2430580243058024351124533Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUncharacterized conserved protein UCP0167197e-27122
NC_007677:3505487:3509872350987235114131542Salinibacter ruber DSM 13855, complete genomeNa+/solute symporter1e-25117
NC_014032:3573920:3577714357771435792551542Salinibacter ruber M8 chromosome, complete genomeNa+/solute symporter2e-25117
NC_015703:4933430:4978850497885049805471698Runella slithyformis DSM 19594 chromosome, complete genomeNa+/solute symporter4e-25116
NC_013037:6281164:6335000633500063365711572Dyadobacter fermentans DSM 18053, complete genomeSSS sodium solute transporter superfamily4e-1996.7
NC_011026:2269986:2293566229356622950411476Chloroherpeton thalassium ATCC 35110, complete genomeNa+/solute symporter2e-1894.4
NC_010571:2041277:2044503204450320462841782Opitutus terrae PB90-1, complete genomeSSS sodium solute transporter superfamily2e-1790.9
NC_015144:545999:5459995459995475341536Weeksella virosa DSM 16922 chromosome, complete genomeNa+/solute symporter6e-1789.4
NC_013037:48900:4890048900505971698Dyadobacter fermentans DSM 18053, complete genomeNa+/solute symporter7e-1789
NC_019904:5130458:5149179514917951506511473Echinicola vietnamensis DSM 17526 chromosome, complete genomeNa+/proline symporter8e-1582
NC_015703:1898159:1922679192267919242921614Runella slithyformis DSM 19594 chromosome, complete genomesodium solute transporter superfamily protein1e-1481.6
NC_019904:2327842:2343077234307723445461470Echinicola vietnamensis DSM 17526 chromosome, complete genomeNa+/proline symporter3e-1480.5
NC_013093:7174636:7174636717463671763241689Actinosynnema mirum DSM 43827, complete genomeSSS sodium solute transporter superfamily3e-1377.4
NC_016613:2103792:2121516212151621232851770Vibrio sp. EJY3 chromosome 1, complete sequenceputative transporter7e-1375.9
NC_017167:2203159:2223720222372022253421623Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1SSS sodium solute transporter superfamily protein8e-1375.5
NC_010067:3753971:3773520377352037752351716Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1274.7
NC_016800:979494:9812959812959829531659Corynebacterium diphtheriae BH8 chromosome, complete genomeputative sodium:solute symporter3e-1273.9
NC_014655:17641:2348523485250681584Leadbetterella byssophila DSM 17132 chromosome, complete genomesss sodium solute transporter superfamily7e-1272.4
NC_004663:4692339:4694785469478546962721488Bacteroides thetaiotaomicron VPI-5482, complete genomesodium/iodide co-transporter7e-1272.4
NC_015425:2072703:2078929207892920805271599Clostridium botulinum BKT015925 chromosome, complete genomesodium:solute symporter family protein1e-1171.2
NC_014329:844622:8551918551918568491659Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-1171.6
NC_016781:844613:8551828551828568401659Corynebacterium pseudotuberculosis 3/99-5 chromosome, completesodium/solute symporter1e-1171.6
NC_016932:832748:8433188433188449761659Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSodium/solute symporter1e-1172
NC_004337:3590323:3892662389266238943771716Shigella flexneri 2a str. 301, complete genomeputative cotransporter4e-1169.7
NC_012039:412837:4322264322264337041479Campylobacter lari RM2100, complete genomesodium/proline symporter2e-1067.4
NC_005042:1480761:1486955148695514887181764Prochlorococcus marinus subsp. marinus str. CCMP1375, completeNa+/proline symporter3e-1067
NC_014933:510164:5133475133475148011455Bacteroides helcogenes P 36-108 chromosome, complete genomeNa+/solute symporter1e-0965.1
NC_019908:2247956:2262469226246922639021434Brachyspira pilosicoli P43/6/78 chromosome, complete genomesodium:solute symport protein2e-0963.9
NC_009655:1626466:1630193163019316319261734Actinobacillus succinogenes 130Z chromosome, complete genomeNa+ symporter2e-0963.9
NC_014330:952500:9535709535709550031434Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative sodium:solute symport protein3e-0963.9
NC_008312:884921:8849218849218867051785Trichodesmium erythraeum IMS101, complete genomeNa+/solute symporter6e-0962.8
NC_014655:2747399:2761610276161027632651656Leadbetterella byssophila DSM 17132 chromosome, complete genomesss sodium solute transporter superfamily9e-0962.4
NC_014914:1327245:1349441134944113509221482Taylorella equigenitalis MCE9 chromosome, complete genomePantothenate:Na+ symporter1e-0861.6
NC_008819:1531187:1537222153722215389731752Prochlorococcus marinus str. NATL1A, complete genomeSodium:solute symporter family, possible glucose transporter2e-0860.8
NC_004663:1365429:1367892136789213692081317Bacteroides thetaiotaomicron VPI-5482, complete genomeNa+/solute symporter2e-0860.8
NC_007335:944175:9502109502109519611752Prochlorococcus marinus str. NATL2A, complete genomeNa+/proline symporter3e-0860.5
NC_012973:49208:5035350353518431491Helicobacter pylori B38 chromosome, complete genomeSymporter, SSS family (Proline Permease); membrane protein4e-0860.1
NC_013517:1916020:1932426193242619338771452Sebaldella termitidis ATCC 33386, complete genomeNa+/solute symporter4e-0860.1
NC_015216:652266:6522666522666538491584Methanobacterium sp. AL-21 chromosome, complete genomesodium solute transporter superfamily protein1e-0758.2
NC_008570:2216736:2260336226033622619911656Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecation/acetate symporter ActP2e-0757.8
NC_015164:1158796:1165530116553011669901461Bacteroides salanitronis DSM 18170 chromosome, complete genomeNa+/solute symporter2e-0757.8
NC_011026:2269986:2301879230187923036391761Chloroherpeton thalassium ATCC 35110, complete genomeNa+/solute symporter2e-0757.8
NC_007514:1840971:1848972184897218507381767Chlorobium chlorochromatii CaD3, complete genomesodium:solute symporter family protein2e-0757.8
NC_016609:1774259:1810410181041018120231614Niastella koreensis GR20-10 chromosome, complete genomeSSS sodium solute transporter superfamily protein3e-0757
NC_013172:466300:4663004663004679971698Brachybacterium faecium DSM 4810, complete genomeSSS sodium solute transporter3e-0757
NC_019977:2375703:2393492239349223954081917Methanomethylovorans hollandica DSM 15978, complete genomeNa+/proline symporter3e-0757.4
NC_008463:1912348:1945934194593419475891656Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/proline:solute symporter3e-0757.4
NC_014963:5034904:5048815504881550505361722Terriglobus saanensis SP1PR4 chromosome, complete genomeSSS sodium solute transporter superfamily protein3e-0757.4
NC_014560:53750:5626056260577501491Helicobacter pylori SJM180 chromosome, complete genomesodium/proline symporter4e-0756.6
NC_005957:1549201:1574152157415215757021551Bacillus thuringiensis serovar konkukian str. 97-27, completesodium/solute symporter family protein; possible sodium/proline symporter9e-0755.5
NC_016148:1877711:1908140190814019098581719Thermovirga lienii DSM 17291 chromosome, complete genomeNa+/solute symporter1e-0655.1
NC_013743:505842:5199445199445216321689Haloterrigena turkmenica DSM 5511, complete genomeSSS sodium solute transporter superfamily1e-0655.1
NC_015873:2294312:2296948229694822984591512Megasphaera elsdenii DSM 20460, complete genomesodium/proline symporter1e-0655.1
NC_005945:1523014:1547956154795615495061551Bacillus anthracis str. Sterne, complete genomesodium/solute symporter family protein1e-0655.5
NC_007530:1523060:1548002154800215495521551Bacillus anthracis str. 'Ames Ancestor', complete genomesodium/solute symporter family protein1e-0655.5
NC_003997:1522937:1547879154787915494291551Bacillus anthracis str. Ames, complete genomesodium/solute symporter family protein1e-0655.5
NC_011773:1590560:1615511161551116170611551Bacillus cereus AH820 chromosome, complete genomesodium/solute symporter family protein1e-0655.5
NC_012659:1522960:1547902154790215494521551Bacillus anthracis str. A0248, complete genomesodium/solute symporter family protein1e-0655.5
NC_009614:3748950:3766725376672537684761752Bacteroides vulgatus ATCC 8482 chromosome, complete genomeNa+/solute symporter2e-0654.3
NC_000915:53715:5622456224577141491Helicobacter pylori 26695, complete genomeproline permease (putP)2e-0654.3
NC_018939:53715:5622456224577141491Helicobacter pylori 26695 chromosome, complete genomesodium/proline symporter2e-0654.3
NC_006270:718169:7335577335577350381482Bacillus licheniformis ATCC 14580, complete genomeproline transporter2e-0654.3
NC_013416:820989:8209898209898225091521Aggregatibacter actinomycetemcomitans D11S-1, complete genomesodium/proline symporter2e-0654.7
NC_008314:1465643:1482677148267714842481572Ralstonia eutropha H16 chromosome 2, complete sequenceAPC transporter, SSS family2e-0654.7
NC_014555:47372:4829248292497911500Helicobacter pylori PeCan4 chromosome, complete genomeproline permease (putP)2e-0654.7
NC_010465:2582080:2601729260172926032131485Yersinia pseudotuberculosis YPIII, complete genomesodium/proline symporter2e-0654.7
NC_014029:2388500:2409373240937324108571485Yersinia pestis Z176003 chromosome, complete genomeproline permease2e-0654.7
NC_016513:1126263:1126263112626311277831521Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completesodium/proline symporter3e-0653.9
NC_009488:1465781:1466525146652514699623438Orientia tsutsugamushi str. Boryong, complete genomeNa+/proline symporter4e-0653.5
NC_009614:3714770:3718343371834337199141572Bacteroides vulgatus ATCC 8482 chromosome, complete genomeNa+/glucose cotransporter6e-0652.8