Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:2646792:2656321 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2656321, End: 2657001, Length: 681

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:1209935:122061412206141221294681Salmonella enterica subsp. enterica serovar Newport str. SL254,bifunctional enzyme NanE/nanK3e-118424
NC_011294:1085447:109614410961441096824681Salmonella enterica subsp. enterica serovar Enteritidis strN-acetylmannosamine-6-phosphate 2-epimerase6e-118423
NC_011274:1094379:110505811050581105738681Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91N-acetylmannosamine-6-phosphate 2-epimerase6e-118423
NC_011205:1186097:119677511967751197455681Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853N-acetylmannosamine-6-phosphate 2-epimerase6e-118423
NC_006905:1186895:119757311975731198253681Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein1e-117422
NC_003198:1117687:112836711283671129047681Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-117421
NC_004631:1842050:185176618517661852446681Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-117421
NC_011083:1216500:122299612229961223676681Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bifunctional enzyme NanE/nanK2e-117421
NC_003197:1207597:121827412182741218954681Salmonella typhimurium LT2, complete genomeputative inner membrane protein2e-117421
NC_011094:1166271:117694911769491177629681Salmonella enterica subsp. enterica serovar Schwarzengrund strN-acetylmannosamine-6-phosphate 2-epimerase2e-117421
NC_016810:1163919:117459711745971175277681Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-117421
NC_016856:1165941:117661911766191177299681Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SN-acetylmannosamine-6-phosphate 2-epimerase2e-117421
NC_016857:1163919:117459711745971175277681Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74N-acetylmannosamine-6-phosphate 2-epimerase2e-117421
NC_016860:1205282:121596012159601216640681Salmonella enterica subsp. enterica serovar Typhimurium strN-acetylmannosamine-6-phosphate 2-epimerase2e-117421
NC_016863:1165232:117591011759101176590681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1N-acetylmannosamine-6-phosphate 2-epimerase2e-117421
NC_006511:1770000:177936917793691780049681Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-117419
NC_011147:1763681:177455217745521775232681Salmonella enterica subsp. enterica serovar Paratyphi A strN-acetylmannosamine-6-phosphate 2-epimerase6e-117419
NC_016831:1905289:191942019194201920016597Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-101366
NC_010102:1979742:198917919891791989775597Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-101366
NC_017046:1164176:117485411748541175450597Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-100365
NC_016832:1838220:184870018487001849296597Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,N-acetylmannosamine-6-phosphate 2-epimerase1e-100365
NC_010067:1782998:179352117935211794117597Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-93341
NC_020418:1397112:141420714142071414905699Morganella morganii subsp. morganii KT, complete genomeN-acetylmannosamine-6-phosphate 2-epimerase7e-73273
NC_009708:1497898:151337415133741514075702Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeN-acetylmannosamine-6-phosphate 2-epimerase5e-64243
NC_010634:3155741:315884131588413159542702Yersinia pseudotuberculosis PB1/+, complete genomeputative N-acetylmannosamine-6-phosphate epimerase2e-63242
NC_006155:3237990:324109032410903241791702Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-63242
NC_012668:1688500:171661317166131717335723Vibrio cholerae MJ-1236 chromosome 1, complete sequenceN-acetylmannosamine-6-phosphate 2-epimerase2e-57222
NC_016445:1363831:140157314015731402295723Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeN-acylglucosamine-6-phosphate 2-epimerase2e-57222
NC_009457:1444449:148327614832761483998723Vibrio cholerae O395 chromosome 2, complete sequenceN-acetylmannosamine-6-phosphate 2-epimerase2e-57222
NC_012582:2013515:201469520146952015417723Vibrio cholerae O395 chromosome chromosome I, complete sequencePutative N-acetylmannosamine-6-phosphate 2-epimerase2e-57222
NC_017270:1755552:177995317799531780648696Vibrio cholerae LMA3984-4 chromosome chromosome I, completeN-acetylmannosamine-6-phosphate 2-epimerase1e-57222
NC_012578:1838470:187730618773061878028723Vibrio cholerae M66-2 chromosome I, complete sequenceN-acetylmannosamine-6-phosphate 2-epimerase2e-57222
NC_008800:1300500:132685113268511327486636Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,N-acetylmannosamine-6-phosphate 2-epimerase7e-55213
NC_017219:2646157:268369826836982684393696Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeN-acetylmannosamine-6-phosphate 2-epimerase5e-33140
NC_011593:2650156:268769726876972688392696Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,N-acetylmannosamine-6-phosphate 2-epimerase5e-33140
NC_015634:2492771:251924425192442519912669Bacillus coagulans 2-6 chromosome, complete genomeN-acylglucosamine-6-phosphate 2-epimerase4e-32137
NC_014616:462000:472993472993473667675Bifidobacterium bifidum S17 chromosome, complete genomeN-acylglucosamine-6-phosphate 2-epimerase2e-31135
NC_013515:1125739:113843211384321139130699Streptobacillus moniliformis DSM 12112, complete genomeN-acylglucosamine-6-phosphate 2-epimerase5e-30131
NC_017270:1755552:176920617692061769622417Vibrio cholerae LMA3984-4 chromosome chromosome I, completeN-acetylmannosamine-6-phosphate 2-epimerase2e-28125
NC_003210:2879906:288658428865842887297714Listeria monocytogenes EGD-e, complete genomeN-acetylmannosamine-6-phosphate 2-epimerase3e-26118
NC_007294:219162:219617219617220312696Mycoplasma synoviae 53, complete genomeputative N-acetylmannosamine-6-p epimerase7e-23107
NC_012984:3077004:308270530827053083391687Lactobacillus plantarum JDM1, complete genomeN-acetylmannosamine-6-phosphate 2-epimerase3e-2098.6
NC_012590:637651:661423661423662133711Corynebacterium aurimucosum ATCC 700975, complete genomeputative N-acylglucosamine-6-phosphate 2- epimerase7e-1787.4