Pre_GI: BLASTP Hits

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Query: NC_012125:2646792:2654661 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2654661, End: 2655815, Length: 1155

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1905289:1917676191767619188301155Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0780
NC_011294:1085447:1097330109733010984841155Salmonella enterica subsp. enterica serovar Enteritidis strN-acetylneuraminic acid mutarotase0780
NC_016832:1838220:1846955184695518481091155Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,N-acetylneuraminate epimerase0779
NC_003198:1117687:1129554112955411307081155Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0779
NC_004631:1842050:1850105185010518512591155Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0779
NC_011205:1186097:1197961119796111991151155Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853N-acetylneuraminic acid mutarotase0778
NC_011083:1216500:1224194122419412253361143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,mutatrotase, YjhT family0770
NC_011080:1209935:1221800122180012229601161Salmonella enterica subsp. enterica serovar Newport str. SL254,kelch domain-containing protein YjhT0766
NC_006905:1186895:1198759119875911999191161Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein0766
NC_011094:1166271:1178136117813611792961161Salmonella enterica subsp. enterica serovar Schwarzengrund strN-acetylneuraminic acid mutarotase0763
NC_010102:1979742:1987429198742919885771149Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0758
NC_003197:1207597:1219460121946012206201161Salmonella typhimurium LT2, complete genomeputative inner membrane protein0758
NC_016810:1163919:1175783117578311769431161Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0758
NC_016856:1165941:1177805117780511789651161Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein0758
NC_016857:1163919:1175783117578311769431161Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein0758
NC_016860:1205282:1217146121714612183061161Salmonella enterica subsp. enterica serovar Typhimurium strN-acetylneuraminic acid mutarotase0758
NC_016863:1165232:1177096117709611782561161Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1N-acetylneuraminic acid mutarotase0758
NC_017046:1164176:1176040117604011772001161Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0758
NC_010067:1782998:1791770179177017929301161Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0722
NC_020418:1397112:1415882141588214170361155Morganella morganii subsp. morganii KT, complete genomeSialic acid-induced transmembrane protein YjhT(NanM)2e-102372
NC_010465:2582080:2595798259579825969761179Yersinia pseudotuberculosis YPIII, complete genomeKelch repeat-containing protein2e-88326
NC_004088:2691565:2710224271022427114021179Yersinia pestis KIM, complete genomehypothetical protein8e-88324
NC_003143:2101902:2105426210542621066041179Yersinia pestis CO92, complete genomehypothetical protein8e-88324
NC_006155:2084669:2087052208705220882301179Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein8e-88324
NC_008150:1384102:1388505138850513896831179Yersinia pestis Antiqua, complete genomehypothetical protein8e-88324
NC_005810:1663672:1682697168269716838751179Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-88324
NC_009381:1414985:1429581142958114307591179Yersinia pestis Pestoides F chromosome, complete genomeN-acetylneuraminic acid mutarotase8e-88324
NC_014029:2388500:2403460240346024046381179Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-88324
NC_017154:2100587:2104968210496821061461179Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-88324
NC_017160:2414000:2432466243246624336441179Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-88324
NC_017168:3535786:3554409355440935555871179Yersinia pestis A1122 chromosome, complete genomeN-acetylneuraminic acid mutarotase8e-88324
NC_010159:2128157:2132568213256821337461179Yersinia pestis Angola, complete genomekelch domain protein3e-87322
NC_008258:4345400:4357011435701143582251215Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-79295
NC_004741:4364235:4377439437743943786531215Shigella flexneri 2a str. 2457T, complete genomehypothetical protein4e-79295
NC_004337:4374500:4386343438634343875571215Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-79295
NC_017328:4417000:4428788442878844300021215Shigella flexneri 2002017 chromosome, complete genomehypothetical protein4e-79295
NC_016822:4889656:4899380489938049004861107Shigella sonnei 53G, complete genomeN-acetylneuraminic acid mutarotase3e-79295
NC_011415:4767892:4786622478662247877281107Escherichia coli SE11 chromosome, complete genomeN-acetylneuraminic acid mutarotase6e-79294
NC_010498:4930649:4942284494228449433901107Escherichia coli SMS-3-5, complete genomekelch repeat-containing protein1e-78293
CP002797:4656327:4667161466716146682671107Escherichia coli NA114, complete genomeN-acetylneuraminic acid mutarotase2e-78293
NC_011601:4856717:4876283487628348773891107Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeN-acetylneuraminic acid mutarotase3e-78292
NC_010473:4630361:4637490463749046385961107Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-78292
AC_000091:4534935:4542339454233945434451107Escherichia coli W3110 DNA, complete genomehypothetical protein2e-78292
NC_000913:4528278:4535682453568245367881107Escherichia coli K12, complete genomehypothetical protein2e-78292
NC_011751:5070597:5077018507701850781241107Escherichia coli UMN026 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-78292
NC_012759:4467288:4474417447441744755231107Escherichia coli BW2952 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-78292
NC_012947:3883484:3895205389520538963111107Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeN-acetylneuraminic acid mutarotase2e-78292
NC_012967:4510393:4517797451779745189031107Escherichia coli B str. REL606 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-78292
NC_011742:4873351:4880480488048048815861107Escherichia coli S88 chromosome, complete genomeN-acetylneuraminic acid mutarotase6e-78291
NC_011750:4978000:4985114498511449862201107Escherichia coli IAI39 chromosome, complete genomeN-acetylneuraminic acid mutarotase4e-78291
NC_007946:4875997:4902392490239249036061215Escherichia coli UTI89, complete genomehypothetical protein2e-77290
NC_008563:4905186:4918621491862149198351215Escherichia coli APEC O1, complete genomehypothetical protein2e-77290
NC_009801:4882684:4899888489988849009941107Escherichia coli E24377A, complete genomekelch repeat protein2e-77290
NC_011353:5455224:5466215546621554673211107Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-77290
NC_013008:5411285:5422276542227654233821107Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-77290
NC_009800:4529504:4542662454266245437681107Escherichia coli HS, complete genomekelch repeat protein1e-77290
NC_013364:5255700:5267807526780752689131107Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-77290
NC_008253:4817864:4842890484289048439961107Escherichia coli 536, complete genomehypothetical protein YjhT precursor1e-77290
CP002185:4791811:4800102480010248012081107Escherichia coli W, complete genomeconserved hypothetical protein1e-77290
CP002516:4199133:4211662421166242127681107Escherichia coli KO11, complete genomemutarotase, YjhT family1e-77290
NC_016902:4199133:4211662421166242127681107Escherichia coli KO11FL chromosome, complete genomemutarotase, YjhT family1e-77290
NC_002695:5381576:5392567539256753937811215Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-77289
NC_013941:5219841:5230832523083252320461215Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeN-acetylneuraminate-epimerase precursor2e-77289
AP010958:5272863:5292536529253652936421107Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-77289
CU928160:4570498:4598303459830345994091107Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-77289
NC_011741:4570498:4598303459830345994091107Escherichia coli IAI1 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-77289
NC_013353:5272863:5292536529253652936421107Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-77289
NC_011745:5114500:5123927512392751250331107Escherichia coli ED1a chromosome, complete genomeN-acetylneuraminic acid mutarotase8e-77287
NC_007613:4403070:4411445441144544126591215Shigella boydii Sb227, complete genomehypothetical protein2e-76286
NC_004431:5123325:5132382513238251335961215Escherichia coli CFT073, complete genomeHypothetical protein yjhT precursor1e-76286
NC_013361:5580741:5586280558628055872811002Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylneuraminic acid mutarotase3e-72272
NC_004431:3409389:3473463347346334745811119Escherichia coli CFT073, complete genomeHypothetical protein yjhT precursor2e-70266
NC_011745:4862218:4873936487393648750541119Escherichia coli ED1a chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-70266
NC_011751:3453683:3496570349657034976881119Escherichia coli UMN026 chromosome, complete genomeN-acetylneuraminic acid mutarotase2e-70266
NC_017270:1755552:1762645176264517637991155Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid-induced transmembrane protein3e-57222
NC_009457:1444449:1476998147699814781521155Vibrio cholerae O395 chromosome 2, complete sequenceN-acetylneuraminic acid mutarotase1e-56220
NC_012578:1838470:1871028187102818721821155Vibrio cholerae M66-2 chromosome I, complete sequenceN-acetylneuraminic acid mutarotase1e-56220
NC_012582:1976962:2008417200841720095711155Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein1e-56220
NC_012668:1688500:1722459172245917236131155Vibrio cholerae MJ-1236 chromosome 1, complete sequenceN-acetylneuraminic acid mutarotase1e-56220
NC_016445:1363831:1395295139529513964491155Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeN-acetylneuraminic acid mutarotase1e-56220
NC_016944:1937645:1970203197020319713571155Vibrio cholerae IEC224 chromosome I, complete sequenceN-acetylneuraminic acid mutarotase1e-56220
NC_002505:1892430:1923895192389519250491155Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-56220
NC_006511:1770000:1777704177770417788511148Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-55217
NC_016944:1937645:1969118196911819701881071Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein5e-41168
NC_002505:1892430:1922810192281019238801071Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein5e-41168
NC_009457:1444449:1475913147591314769831071Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein5e-41168
NC_012578:1838470:1869943186994318710131071Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein5e-41168
NC_012582:1976962:2007332200733220084021071Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein5e-41168
NC_012668:1688500:1723628172362817246981071Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid-induced transmembrane protein NanM5e-41168
NC_016445:1363831:1394210139421013952801071Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-41168
NC_017270:1755552:1761623176162317626301008Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid-induced transmembrane protein4e-35149
NC_019960:1272956:1291222129122212923131092Prevotella dentalis DSM 3688 chromosome 1, complete sequencecyclically-permuted mutarotase family protein4e-1582.8
NC_013515:1125739:113995511399551140890936Streptobacillus moniliformis DSM 12112, complete genomehypothetical protein4e-1375.9
NC_015311:2826000:2850974285097428520501077Prevotella denticola F0289 chromosome, complete genomecyclically-permuted mutarotase family protein9e-1065.1
NC_010498:4899167:490846549084654909044580Escherichia coli SMS-3-5, complete genome2e-0757.8